AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00156 ATGGATTTGATCGAATTGGAAAAAAACGGTGAAATTGATGCTAAAATCAAAGATAATGGCAAGTATGATGCTGAAAATAACGATGGTAAATCATTGGATGAGAACGTATCACCGCCGCCGGCCGCCACAAAGGGGCGGGGGTTGAGGAAATGGCGGAGGATTCGTAGAGAATCCGGCAAGGAAACAAATGCTAGTTTAGATAGTAATCGGAAAAGAGGTTCAACCGCTTTTCCATTAGGAACAAAACAAAAGAGCGAAGGGTCGAGTTCTTCAACAAATGCCATATCGAACGCTTTGGATCTTCGTAGTCCACTTTCAGTGGATTTCGGCGGTGGTTTTGCCGCTAGAGCGGATTCTGAGAACAGCAGATCTTCAACGGCGGCTAGTGGTCCACGAGCGAAGAATTTGGGTGTGAGTGGGAAGAATTTGGGGGTTTTGGCCCAATCGGGTGATCAGATGGGGAAAAGTCGAAGTGATATAACGAATAAGAAGGCTAGAGGGGTTAGAATCAAGAAAGAGAATTCGATTTCGAGTGTGGAATCGGATTCTAGAAGCTCGAATTTTGTTTTTGTGGAGGGTAGTAATGGTAGACAAAGTTGCAGGTTGGGGAATTATGAAGAAGATTATAGTGATGATGCTCGGAATGGTGATAGATGTTTAAATGAGGAAGGTGTGAATGAAAACGAGGCTGATTCTGAAGAGGTTTCGCATGAAGATTTAGGAGGGGAGAATTCTTGGGAGGCGAAGGAAGGAAAGGTTGATGAGCGTGTGGGGTCCGGGGATCGGGATGATTTGGTGGAATCCGTGATGCCGCTTCATTTGGCTCAAGAAGCACTCGAGAGAGAAATCCAGAAATTGAGGGATGTCGGTAAAGAGGATCCTTTGTCCAACGACACCAAGATCTCCGACCTTGAATCCATCTTGAATTTTGGAAACATGAAGATCGAACATGAAGAAATCTTGAAGCAAAGAATTGCAGCGGAGGTGGAATTTCTAGTCATATCGAATACAATCCAAAACCTGAAGACGGGTTACAAAGATCAAATGAATCTTACGGTACAACAAAAGAATATACCAGTATCCGTACCAGTACCAGTACCAGAAGAGGTGAAAGTTGAAGATGAAGGTGAAACTGCTCGAAAACTGCGAAAAGGGGTATTTAGATATGCATTTTGGTTTGTAATTCAATTGGTATTGTTTCTTGTAGTTGTGTATCTTTTGGTATTGCAGTTTTCATCCCAAAATATGGAGGTTTTGCCCACTTAA 1266 43.05 MDLIELEKNGEIDAKIKDNGKYDAENNDGKSLDENVSPPPAATKGRGLRKWRRIRRESGKETNASLDSNRKRGSTAFPLGTKQKSEGSSSSTNAISNALDLRSPLSVDFGGGFAARADSENSRSSTAASGPRAKNLGVSGKNLGVLAQSGDQMGKSRSDITNKKARGVRIKKENSISSVESDSRSSNFVFVEGSNGRQSCRLGNYEEDYSDDARNGDRCLNEEGVNENEADSEEVSHEDLGGENSWEAKEGKVDERVGSGDRDDLVESVMPLHLAQEALEREIQKLRDVGKEDPLSNDTKISDLESILNFGNMKIEHEEILKQRIAAEVEFLVISNTIQNLKTGYKDQMNLTVQQKNIPVSVPVPVPEEVKVEDEGETARKLRKGVFRYAFWFVIQLVLFLVVVYLLVLQFSSQNMEVLPT 421
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00156 421 MobiDBLite consensus disorder prediction 118 132 - -
Sain12g00156 421 MobiDBLite consensus disorder prediction 208 260 - -
Sain12g00156 421 PANTHER WPP DOMAIN-INTERACTING PROTEIN 2 298 357 IPR044696 -
Sain12g00156 421 MobiDBLite consensus disorder prediction 1 93 - -
Sain12g00156 421 MobiDBLite consensus disorder prediction 115 140 - -
Sain12g00156 421 MobiDBLite consensus disorder prediction 68 93 - -
Sain12g00156 421 MobiDBLite consensus disorder prediction 1 30 - -
Sain12g00156 421 MobiDBLite consensus disorder prediction 208 225 - -
Sain12g00156 421 MobiDBLite consensus disorder prediction 235 260 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00156 K27869 WPP domain-interacting protein
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Event-related genes

Select Gene_1 Gene_2 Event_name
138645 Sain12g00156 Sain13g02680
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr12:2879046 Sain13g02680 Sain-Chr13:138892759 wgd