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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00159 ATGAAGATTCTCATAATCTCCGCTCTCCTTCTCCAATGCTGCATCTCCACCTGTTTCTCTTCTCCGCTTTCCATTTCAGATGGTGTATTCACATCTGAAGCTTCGATTGGACGAAATCTACTTCAGGCTAAGAAACCTTGTCCTGTAAACTTTGAGTTCATGAATTACACAATCATCACTAGCCGTTGCAAAGGACCGCAGTACCCTCCTAATCTATGTTGTCAAGCATTCAAAGACTTTGCTTGCCCTTATGCCGAGGACTTAAATGACTTATCAAACGAGTGTTCGTCAACAATGTTCAGCTACATCAATCTCTACGGAAAGTATCCACCTGGGCTTTTTTCTAGCTTGTGTCGGGATGAAAAAATTGGGCTGATCTGTCCAGCTTTAGCACCAGGAGCAGGAAGGAATAGTGTAGCTGATTCTAACAGCAGCCACAATATCCGCAATCAGCCCCTATTGCTGATGCTAATTGCAGGGTTCCTAATCTTCTTGTCCCAGTGGTTTTAA 510 43.53 MKILIISALLLQCCISTCFSSPLSISDGVFTSEASIGRNLLQAKKPCPVNFEFMNYTIITSRCKGPQYPPNLCCQAFKDFACPYAEDLNDLSNECSSTMFSYINLYGKYPPGLFSSLCRDEKIGLICPALAPGAGRNSVADSNSSHNIRNQPLLLMLIAGFLIFLSQWF 169
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00159 169 PANTHER GPI-ANCHORED PROTEIN LLG1-RELATED-RELATED 8 165 IPR039307 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00159 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
138649 Sain12g00159 Sain13g02675
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr4:143297866 Sain12g00159 Sain-Chr12:2908380 transposed
Sain Sain-Chr12:2908380 Sain13g02675 Sain-Chr13:138859006 wgd