Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00184 | ATGGCGGAAATTGCAGGAAGGTATGAACAGCAAATTTTGATGAACAGAAGCGTACAAGTAATCGAGGAAGAGATTTGGGCGAAGCATTACTCGTCGAATCATCAGATACTGCTGGTCGGAGAAGGCGATTTCTCCTTTGCTCTCAGCTTGGCTGTCTCGTTTGGCTCAGCTTTCAACATCGTAGCTTCTTCTATCGACTCTTATGATGTTGTGATTAGGAAATATAAGAAAGCGAAAACAAACATGGATCGTTTGTCTAGATTGGGAGCTCGGCTGTTATACGGTGTTGATGCAAGAACGATGAAGTTTCATGTTGACCTTCATATGCGAAAGTTTGATCGCGTCGTATACAATTTCCCACATGCTGGTTTTTTCGGAAAAGAAAGCGATCATGGAGTCATCACGATACACCGAAATCTGGTTTGCAGTTTCTTCAAGAATGCAAGTAGGATGTTACGACCAAACGGCGAAGTTCACGTATCCCACAAGACTAAATTCCCGTTCAACAGTTGGAACATCGAAGAACTTGCCTCCCAAAGCTGTTTAACATTGCTTGAATGTGTCGAATTCAAGATCAAAGATTATCCGGGATACAAAAACAAACGAGGAGACGGGTCAAGATCCGACGAACCCTTTCCATTAGGAAAGTGTTGTACTTTCAAGTTCATATTATCAACAGCCAAAAAACCAACCACTTTATATCATAAAAATAATCAAAAACCTCTAGAAATCCCGTTGCAAAAAGCGAATGCGAATTTGTTTATAAATCCTCCCCCGGTTATCGACAATGGAGAATGCTTTAGGATTTTCGCAGAGTATTTCAATCATGCACGATCGACCAAAGGGCAAACTGATTACTATCTATGCAGTTCTGTTTCGGATCATTTGAGATTTGGGCTTGAAAGATACATGGCTGAAAATCATGGAAGACGGCTGAATGGCTACGTAAATCTTTTGGAAGAGCTTCGGAGTTTGAGTAAACGGAGGATTCAGTTCTTGCAAAACCGGTTACTGGAAATTGATCACCGGCGTGGCTTGTAG | 1041 | 41.59 | MAEIAGRYEQQILMNRSVQVIEEEIWAKHYSSNHQILLVGEGDFSFALSLAVSFGSAFNIVASSIDSYDVVIRKYKKAKTNMDRLSRLGARLLYGVDARTMKFHVDLHMRKFDRVVYNFPHAGFFGKESDHGVITIHRNLVCSFFKNASRMLRPNGEVHVSHKTKFPFNSWNIEELASQSCLTLLECVEFKIKDYPGYKNKRGDGSRSDEPFPLGKCCTFKFILSTAKKPTTLYHKNNQKPLEIPLQKANANLFINPPPVIDNGECFRIFAEYFNHARSTKGQTDYYLCSSVSDHLRFGLERYMAENHGRRLNGYVNLLEELRSLSKRRIQFLQNRLLEIDHRRGL | 346 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00184 | 346 | PANTHER | PHENYLALANYL-TRNA SYNTHETASE | 19 | 202 | - | GO:0005737(PANTHER)|GO:0070042(PANTHER)|GO:0070475(PANTHER) | |
| Sain12g00184 | 346 | Gene3D | Vaccinia Virus protein VP39 | 29 | 189 | IPR029063 | - | |
| Sain12g00184 | 346 | Pfam | rRNA (uridine-N3-)-methyltransferase BTM5-like | 37 | 202 | IPR019446 | GO:0070042(InterPro)|GO:0070475(InterPro) | |
| Sain12g00184 | 346 | FunFam | Os09g0479300 protein | 34 | 185 | - | - | |
| Sain12g00184 | 346 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 63 | 168 | IPR029063 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00184 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:3202474 | Sain12g00184 | Sain-Chr12:3299348 | dispersed | |
| Sain | Sain-Chr12:3299348 | Sain1g00353 | Sain-Chr1:16157295 | dispersed | |
| Sain | Sain-Chr12:3292878 | Sain12g00184 | Sain-Chr12:3299348 | tandem |