Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00188 | ATGGCGATTTTCGCGGGAAAATTCGTTAATGGCGCTGCATTCGAGCTTCAGTCCCGACTGCTCTTGAAGCCCTGGGTGAAGAAGATTGTGGTTCGATGCTGTTCGAATTCCGGGGAAAGATCTAAGGATTTTCCAGTAAGGTACACTCCTAAGAGATCTTCGAAATTCAATAAACTTGATGATTCTAATTCGTCTCCGAAGGACTCTGAGAATCACGAAGTGCGTCGATTCACAAACCCTGATTCGTCGAGTGATGAAATTTCAAATGGTGGGGAGAGGTCGAGGATAGGATTATTTTCGGACAAAAAATCACCAGATGACGGTTTTAAGTCAGGCAAGTTAATATCAAAAGAAAAGATAATTGGTAATTCAGCTGTGAGATCAGAGGTGAGAGAACATGATTATAAACGGGGATTTGCGGAGTCAGATTCTATTGAAGAACTTGATGAGTTTGATGCCATGGATGGTCCCGAGGAGGTTTTGGATGAACTCGAGACTCATAATGAAAATTACGAAATCAAAAGTCTCACACCTGAACCTAGTAAAACTAAAGAAGCAGCTGAGAAGACGACAGTTGGATTGCTTGCTGCAAGAGCATACACAGCACTCGAGCTGAAGAAGAAACTACTAGGAAAGAAGTTCTCCCATGAAGTTGTCAATGCTGTGATTTCTGACTTCCAGAACAGAGGGTTTATCAATGATTTATCATATGCTGAGTCATTTTCTCGATCGAGATGGTCTTCATCAAGTTGGGGTCCATGTAGAATCAAACAAGCCTTGACCAAAAAGGGTGTTAATGATCTTGATGCACAAAAAGCAATAAAATTGGTTTTCGACGATGGTGAACCTAGCGATGATCAAGGTTCTAGACTTGGATTATCAAAGCCCTCGTTGGATCATCTATTTGCTCAAGCTTCAAAGCAGTGGCTTCGTGCTAAAGATCTCCCCATTGAAAAACAAAAGTCAAGGATCATCACATGGCTCCAATACCGTGGCTTTAATTGGGGCGTTATCAACTTCATCTTGAAAAGGTTACAATCTGGGCATCCTCCATAG | 1056 | 41.86 | MAIFAGKFVNGAAFELQSRLLLKPWVKKIVVRCCSNSGERSKDFPVRYTPKRSSKFNKLDDSNSSPKDSENHEVRRFTNPDSSSDEISNGGERSRIGLFSDKKSPDDGFKSGKLISKEKIIGNSAVRSEVREHDYKRGFAESDSIEELDEFDAMDGPEEVLDELETHNENYEIKSLTPEPSKTKEAAEKTTVGLLAARAYTALELKKKLLGKKFSHEVVNAVISDFQNRGFINDLSYAESFSRSRWSSSSWGPCRIKQALTKKGVNDLDAQKAIKLVFDDGEPSDDQGSRLGLSKPSLDHLFAQASKQWLRAKDLPIEKQKSRIITWLQYRGFNWGVINFILKRLQSGHPP | 351 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00188 | 351 | PANTHER | REGULATORY PROTEIN RECX FAMILY PROTEIN | 13 | 350 | IPR003783 | GO:0006282(InterPro) | |
| Sain12g00188 | 351 | Gene3D | - | 296 | 349 | IPR036388 | - | |
| Sain12g00188 | 351 | Gene3D | - | 188 | 231 | IPR036388 | - | |
| Sain12g00188 | 351 | Pfam | RecX, second three-helix domain | 233 | 273 | IPR053924 | - | |
| Sain12g00188 | 351 | Hamap | Regulatory protein RecX [recX]. | 156 | 349 | IPR003783 | GO:0006282(InterPro) | |
| Sain12g00188 | 351 | Pfam | RecX, third three-helix domain | 299 | 342 | IPR053925 | - | |
| Sain12g00188 | 351 | MobiDBLite | consensus disorder prediction | 40 | 104 | - | - | |
| Sain12g00188 | 351 | Gene3D | - | 233 | 276 | IPR036388 | - | |
| Sain12g00188 | 351 | MobiDBLite | consensus disorder prediction | 44 | 80 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00188 | K03565 | regulatory protein |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:3324148 | Sain2g00624 | Sain-Chr2:30464713 | transposed |