AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00194 ATGGAGCTGGTGCCATATTCTGATCCTAATAACACCACTACTTCCACCTCCTCCGCCTCACCACCCTGGCAAGACATGTTCCGATCAGCCTCCACCCGCAAACCAGATCCACCTCCCCAGCCTCAGCCTCAGCCTCCGCCGCCGCTGACCCCACCGCAATCCACCACCAATCCAGATCAAGACGATGACACCTCCGGCGACTCTCAGGTACGCCTTGCACTCTACATATCCATGGCACACGCCGGCTTAGCTTTTGCTATCTTCCTCCTCTACGGTGTTTCAAAACTACTTGAAGAATATCTACGACCCATTTTATGGGCTGTTCTTTGTTCGATTCCACTTCGAGGAATCCAGCAAACTCTCGTTTCGTTTTGGTCTGAGCCTTTGGAATTGGGTCTTACAGAAACTGTACTAGCTATACCTGTGTCTGTGTATAGGGTTTTCATTGGGACACTTGTTGAAATCAGAGATGTGTTATATAAACTGATTCGTCATAAGAAGAAGAAGAAGATGAAGAAACCGGATATTGCGAGACGAAAACGAAGTGGGTTTTCGATTTTGTTGAGATGGTTGGTGTCTTTTTGGGTTTTTGTGATGGCTTATGAACAATTTGATGTTCTTGGTGCCATCACTTTGTTAGGATTAGGGTTTATGTTTACATCTACCAATGTGGAATCTGCTGTTACTTCGTTTTCGAATCGTAGTTTTAGAAAGAATCGTCATACGGCGTTCCTCACGAAATGGATTTCGAATCGATTGGAAACGATAGTGGCAATCGGGTTGATTTTTGGTATGATTTTGGGTTCTTTGGCTGGGACTATGTTTTTCTCATACAAGATTGGAGTTGAAGGGAAAGATGTGGTTTATTCGATAAAATCCCACGTCGAAGAGAGCAATTACACACAGAAAATAGGGTTGAAGCAATGGATCAACGACAACGATGTGCCAGGGATGGTGGATCGGTACACTACCCAGTTTTACGAAACTGTATATGAACAGATTGATAGTTTAGCAATGCAGTATAATATGACTGAAATCGTTCAAGAAATGAAACAAATAGTTGCACCACGATCCGTTAACTCTACTGCACCATCTACGGCATTGGTAGCCCCAAACCCATATGCAGAAAAGATTCTAAGGTTGAAAAAAATGGTTACTAATCGCGAATGGGCAGCAATTTATCCAGAAGTTAACGCCATGTTTAAAGAGGCACGGGTCAGCAGGGAGGATATGATTGAGAAAGCAAAAGCAATCGCTTTTCAAGGAAAAGATGTGGTTCAGCGAGTGCTTGCAAGTAGTAAATCGATTGTGGGTGGAAGCACGAAGCTTGTTTTTGTAGTTATCGAGTCGATTGTTTCTGGAGCAGCAGGTATTTTCAATTTTGTTTCTCAATCGATGGTTTTCATATGGGTTTTGTACTCTCTTATAACATCAAAGTCAGGAGGGGTTACTGAACAAGTTATGTATATGATTCCAATTTCAAGATCGGCTAGGACTCGGTGTGTTGAGGTTATTGATAAAGCTATTTCTGGGGTTCTTTTGGCAACAGCGGAGATCGCTTTCTTTCAAGGGTGTCTCACTTGGCTTTTGTTTAGACTATTTAACATTCATTTCTTGTATATGTCAACGCTGCTCGCGTTTATCAACCCTTTGCTCCCAATATTTCCCTATTTCATCTCAACGATCCCAGCCGCGTTGCAACTGGTGTTGGAAGGTCAATACGTGGTTGCTATTTGCTTGTCGATTATTCATCTTTTGCTTATGGACTATGGTACTACTGAGATTCAAGAGGACATACCTGGGCACAGTGCTTATCTCACTGGGCTTAGCATCATCGGTGGAGTGGCATTGTTCCCATCTGCATTAGAGGGAGCAATAATGGGGCCATTGATGACAACTGTTGTTATTGCTCTTAAGGATTTGTATGTAGAATATGTTTTGGATGAACCAAAAGAAAGCAAAAAGGAGTAG 1971 42.82 MELVPYSDPNNTTTSTSSASPPWQDMFRSASTRKPDPPPQPQPQPPPPLTPPQSTTNPDQDDDTSGDSQVRLALYISMAHAGLAFAIFLLYGVSKLLEEYLRPILWAVLCSIPLRGIQQTLVSFWSEPLELGLTETVLAIPVSVYRVFIGTLVEIRDVLYKLIRHKKKKKMKKPDIARRKRSGFSILLRWLVSFWVFVMAYEQFDVLGAITLLGLGFMFTSTNVESAVTSFSNRSFRKNRHTAFLTKWISNRLETIVAIGLIFGMILGSLAGTMFFSYKIGVEGKDVVYSIKSHVEESNYTQKIGLKQWINDNDVPGMVDRYTTQFYETVYEQIDSLAMQYNMTEIVQEMKQIVAPRSVNSTAPSTALVAPNPYAEKILRLKKMVTNREWAAIYPEVNAMFKEARVSREDMIEKAKAIAFQGKDVVQRVLASSKSIVGGSTKLVFVVIESIVSGAAGIFNFVSQSMVFIWVLYSLITSKSGGVTEQVMYMIPISRSARTRCVEVIDKAISGVLLATAEIAFFQGCLTWLLFRLFNIHFLYMSTLLAFINPLLPIFPYFISTIPAALQLVLEGQYVVAICLSIIHLLLMDYGTTEIQEDIPGHSAYLTGLSIIGGVALFPSALEGAIMGPLMTTVVIALKDLYVEYVLDEPKESKKE 656
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00194 656 MobiDBLite consensus disorder prediction 1 66 - -
Sain12g00194 656 PANTHER TRANSMEMBRANE PROTEIN 26 654 IPR002549 -
Sain12g00194 656 MobiDBLite consensus disorder prediction 1 27 - -
Sain12g00194 656 MobiDBLite consensus disorder prediction 34 54 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00194 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
138666 Sain12g00194 Sain13g02658
138667 Sain12g00194 Sain9g00054
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr12:3471422 Sain13g02658 Sain-Chr13:138655700 wgd
Sain Sain-Chr12:3471422 Sain9g00054 Sain-Chr9:1511566 wgd