Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sain12g00230	ATGGATTCTTCGGATGATGAGGGAGCGACTCTTCTAAACGTCATATCAGACTACTATTTTGTGGGTGCGGAGGATGAACCCCTTTCGTTTACGGAGTTGCCTATCCAATGGGGTGAAAATGAGAGTTCAGATGACAATAAGGGCCAGATTTTTCTTAGGGGCACTGCTGATAATGGTCTTCAAAAGCTATATAAGCCAGTGAAGGCATGGAAATATGATCTTTCAAAAGCAAAGCCAGAGATATCCGTGCTTTCTAGAGATAACAACTGGATCAAGCTTCAAAAACCCAAGAAGAGTTTTGAAAGCATGATCAGGACAATCTTAATCACTGTGCGTTGTCTTCATTTCTTTAAGGCAAAACCTGAAGCATCTGGCAAATCACTTTGGGACCATCTGTGTAAAGTTTTCAGCTTGTATGACATTAGGCCTTCAGAGAATGATCTGGTAGATCATCTCAACTTCATCAGCGAAGCTGTGAAAAGGGACGAAACATTAGGAAAATCCAAGTTTTTGGCTTCATTTCTGGAGAAGAAACCGAGAAAGAGGAAAGGTTTTGATGAGAATGCTGAAGTTACTATGAAACCCAGCTTTATAGTTGATGATATGAACGATGAATCCGTGGATGAGGAACTCACCATAAAATCAGTTGAAGAGTCCGAGTCTGATGATGAGGATGATGGTTTTGAAACAGTTTGTGCAATCTGTGATGATGGCGGTGATCTTACCTGTTGTGAAGGGAAGTGTTTTAGGTCATTTCATGCAACCATAGAATCTGCAGACTCCAAATGTGAATCGCTAGGCCTACGTGCTGAAGTAGTAAAGAGATCTCGACATTTTCTTTGCCCAAATTGTTTTCATAAACAACACCAATGCTTTGTTTGCGGTGAATTGGGGTCTTCGGATAAATCTTCTGTTGCAGAGGTTTTTTGCTGTAGTTCTGCAACTTGTGGCCATTTTTATCACCCAAACTGTGTTGCAAAGCTGCTTCATGAGGAAGGTGATGCTGCATCACAAGATCTTCAAGAAAAGATCGCTGCCGGCGAGCCATTTACATGTCCTGCCCACAAATGCCATAAATGTAAAAAAGGAGAAGATGAAAAGGTGGAAAGCTTGCAGTTCGCTATTTGCAGGCGATGTCCGAGATCATACCACAGGAAATGCTTGCCCAGCCAGATTGTGTTCTGGAATGAAGATAATGACGAAGACGTTAAAGCCAGGGCTTGGAACGGTCTTTTGCCCAAGTCACGTGCATTATTATATTGTCTAAAACATAAGATCGACGCTAAACTTGGCACTCCTTTAAGGAACTTAAAGTTTCCAGATATTGGCAAAAAGAAAGTTGTGAATTCAGGTTACAGATCTGAGAAGGGGTCTTTTTCAAAGTCTCAGATAAGAGTTGAAAAGTCATTTTCTGCTGTTAGACCAGTGGATTCTCCGAAAAAGAGAGTGACAATGTCATGTGGGCCAGAACCCGTGAAGAGAAAGAGAGTAATGGACGATTCTAAGAAGAATTTATCGATGAAATCTGGCAAGTCGAATTTGGATAATAACGGCCCTTCTTTGGGGAGTAGATTGTATGATTATATGACGTATGAAAACGAACCAAACAATTCCAAGAAGGATCACATTTCGGTTGATAATGATGAGAAAACCCCAAGAGCTGCACCTCGGCGAACTGAAAACAGAAGTTTGCCAACTCTGGATGCCAATTCACGGGAGAGAATACTGACATTGATGAAAAATGCGGCTTCTTCTATTTCGCTGGATATGGTAATAAAGCGTCATGTAGGAAATTTGCCATCAACACATGCAAGTTTATCAAATGTGGACAAATCCATTATCTTGGCCAGGGTGGAGGGCTCTGTGGAGGCTGTTCATTTAGCTTTGAGAAAACTAGATGAAGGATGTAGTATTGAGGATGCAATAGCTGTTTGTGAGCCTCATGTTCTTCATCAACTAATGAGGTGGAAGGATAAGCTCAAAGTGTATTTGGCGCCTTTTCTACATGGAATGAGATATACGTCATTTGGTCGCCATTTTACAAAACCGGAAAAGCTGGAAGAGATTGTCGACAGACTACGTTGGTATGTTGAAAATGGTGATACGATAGTTGATTTTTGCTGTGGAGCAAATGATTTTAGTTATCTCATGAAAAAGCGGCTTGATGAGATGGGAAAAAGTTGCTACTATAAAAATTTTGACATTACCCGGCCGAAGAATGATTTTTGCTTTGAGAAGAGGGATTGGATGAAGGTTCTTCCAAAGGAATTGCCTGATGGATCAAAATTGATCATGGGGCTAAACCCTCCGTTTGGAAAGAATGCCTCTCTCGCAAACCGTTTTATAGACCAGGCGCTTTGGTTTCAGCCCAAGCTTGTCATTCTTATTGTTCCCCCAGAGACTAAAAGGTTAGATCGTGGAAAGATAAAAACTCCATATGATCTAGTTTGGGAGGATGCCAAATTGCTAGCTGGGAAGTCTTTTTATTTCCCGGGATCTGTTGATGCCAATGATAAACAAGTGGATCAATGGAACAGCACTACACCACCGTTGTATCTTTGGAGTCGTTCAGATTATACTAGTAAGCATTCAGCCATTGCTAAGCAGCATGGCCACGTATCCAATGCACCAGAAGTCTACAAAAGATATCGAGACCCGTATGTAGGTGCAGCATATGGGCGGCCAGGTGGCGGCAGTTTTGTGAGTCCTGATTATAGAATCAGAAGACCGGATGCTATCCAATTTCCTGGATACGAGTTGGGTCCCACAAGGATGAACAATATGGGGGGCGGGCCGAATAGGGGGGCGGGGGTTTATGTTCGTCCTAATTCTGGACCTGGGGTGCATATGGATTTTTCCGGTTTTGCCCCTGGTCCATACCACCCTTTTCCGCAGCAAAGCTCATCGGGCGGGTGGCTGAATGAGTGA	2928	42.55	MDSSDDEGATLLNVISDYYFVGAEDEPLSFTELPIQWGENESSDDNKGQIFLRGTADNGLQKLYKPVKAWKYDLSKAKPEISVLSRDNNWIKLQKPKKSFESMIRTILITVRCLHFFKAKPEASGKSLWDHLCKVFSLYDIRPSENDLVDHLNFISEAVKRDETLGKSKFLASFLEKKPRKRKGFDENAEVTMKPSFIVDDMNDESVDEELTIKSVEESESDDEDDGFETVCAICDDGGDLTCCEGKCFRSFHATIESADSKCESLGLRAEVVKRSRHFLCPNCFHKQHQCFVCGELGSSDKSSVAEVFCCSSATCGHFYHPNCVAKLLHEEGDAASQDLQEKIAAGEPFTCPAHKCHKCKKGEDEKVESLQFAICRRCPRSYHRKCLPSQIVFWNEDNDEDVKARAWNGLLPKSRALLYCLKHKIDAKLGTPLRNLKFPDIGKKKVVNSGYRSEKGSFSKSQIRVEKSFSAVRPVDSPKKRVTMSCGPEPVKRKRVMDDSKKNLSMKSGKSNLDNNGPSLGSRLYDYMTYENEPNNSKKDHISVDNDEKTPRAAPRRTENRSLPTLDANSRERILTLMKNAASSISLDMVIKRHVGNLPSTHASLSNVDKSIILARVEGSVEAVHLALRKLDEGCSIEDAIAVCEPHVLHQLMRWKDKLKVYLAPFLHGMRYTSFGRHFTKPEKLEEIVDRLRWYVENGDTIVDFCCGANDFSYLMKKRLDEMGKSCYYKNFDITRPKNDFCFEKRDWMKVLPKELPDGSKLIMGLNPPFGKNASLANRFIDQALWFQPKLVILIVPPETKRLDRGKIKTPYDLVWEDAKLLAGKSFYFPGSVDANDKQVDQWNSTTPPLYLWSRSDYTSKHSAIAKQHGHVSNAPEVYKRYRDPYVGAAYGRPGGGSFVSPDYRIRRPDAIQFPGYELGPTRMNNMGGGPNRGAGVYVRPNSGPGVHMDFSGFAPGPYHPFPQQSSSGGWLNE	975

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sain12g00230	975	CDD	PHD2-NSD	290	355	-	-
	Sain12g00230	975	Gene3D	Zinc-RING finger domain, C3HC4 (zinc finger)	222	287	IPR013083	-
	Sain12g00230	975	MobiDBLite	consensus disorder prediction	494	520	-	-
	Sain12g00230	975	SMART	PHD-3	357	425	IPR001965	-
	Sain12g00230	975	SMART	PHD-3	290	356	IPR001965	-
	Sain12g00230	975	SMART	PHD-3	231	285	IPR001965	-
	Sain12g00230	975	MobiDBLite	consensus disorder prediction	534	557	-	-
	Sain12g00230	975	Pfam	Histone-lysine N-methyltransferase NSD-like, PHD zinc finger	287	355	-	-
	Sain12g00230	975	SUPERFAMILY	FYVE-PHD zinc finger	217	288	IPR011011	-
	Sain12g00230	975	MobiDBLite	consensus disorder prediction	532	563	-	-
	Sain12g00230	975	Pfam	Cytosine specific DNA methyltransferase replication foci domain	15	136	IPR022702	-
	Sain12g00230	975	CDD	PHD3-NSD	357	390	-	-
	Sain12g00230	975	Pfam	Histone-lysine N-methyltransferase NSD-like, variant PHD zinc finger	357	394	-	-
	Sain12g00230	975	Gene3D	Zinc-RING finger domain, C3HC4 (zinc finger)	288	378	IPR013083	-
	Sain12g00230	975	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	670	783	IPR029063	-
	Sain12g00230	975	PANTHER	PHD FINGER-CONTAINING PROTEIN DDB-G0268158	1	879	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sain12g00230	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	138675	Sain12g00230	Sain9g00094

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Sain	Sain-Chr13:128892833	Sain12g00230	Sain-Chr12:4100364	transposed
	Sain	Sain-Chr12:4100364	Sain9g00094	Sain-Chr9:2355984	wgd