AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00239 ATGAAGAACAATCAGGTCATGCAGGACTCTAAGAACATTCCAGAAACACAGCCATTGACCACCCAAGTTTCGCACGAGTCCCAAAGTGACCAGCATAATAATAATAATAATAATAATAATAATGCCACAGAGGCTCCTGTTCCTGACTCTGGTTCAGCCTCCATTTCGAGCAACGATAGCAGAAAAGTTTCTCGGGAGGATATCGAACTTGTCCAGAACTTGATAGAACGATGTTTGCAGCTGTACATGAACAGAGACGAGGTGGTGAAAACGTTACTAAATCGTGCAAGGATTGATCCTGGTTTCACAACTTTAGTTTGGCAGAAATTGGAAGAAGAGAATGCAGACTTTTTCAGAGCCTACTACATACGGCTGAAACTGAAAAAGCAGATCATCATGTTCAATCATTTACTTGAACATCAATACCATCTTATGAAGTATCCGGTGCATCCAAAGCTTCCGCTTGCTCCCATACAAAATGGCATCCATCCCATGCCAGTTAACAACTTACCAATGGGATATCCTGTTCTACCACAACCTTCAATGCCAACTACAGGCCAACCTCATATGAATGCCATGGGTATATCTAGCTGTCATGTGGTTAATGGAGTGCCTGCTCCAAGTAACTTCCATCCGATGCGGATGAACTCCGTAAATGAAAGTATGGGGATGGACAGCAGTGCGGCTGATGTCACCCCTACTATTCCGGCAAATGGGGCCATTTCACCCATTTCAGATATGCCTATGAGTCCTACATCAGTGGCGTCCAGTGGCCATTTCCCCTTTACTGCGTCTGAAATATCAGGGATGGGAGTAGACACATCAGCGCTCGACACAGCTTTTACATCTGACGTGGCAAGTTCCGTAGGATTGCATCTGCCACCTGATAACGGAACTTCTAGACCCTTTGGTCATATTCCGTGGAATTTCAGCCTTTCAGATCTAACAGCAGACTTGTCGAACTTAGGAGATCTAGGAGCTCTTGGAAACTATCCCGGTTCCCCATTTCTGCCATCTAATTCAGATATATTACTTGATTCCCCCGAGCAAGAGGACATCGTGGAGGAGTTCTTTGCTGACTCGGTTCCTGGACCACCGTGCTCCAATTCAGACGAAGAGAAATCCTAG 1128 45.21 MKNNQVMQDSKNIPETQPLTTQVSHESQSDQHNNNNNNNNNATEAPVPDSGSASISSNDSRKVSREDIELVQNLIERCLQLYMNRDEVVKTLLNRARIDPGFTTLVWQKLEEENADFFRAYYIRLKLKKQIIMFNHLLEHQYHLMKYPVHPKLPLAPIQNGIHPMPVNNLPMGYPVLPQPSMPTTGQPHMNAMGISSCHVVNGVPAPSNFHPMRMNSVNESMGMDSSAADVTPTIPANGAISPISDMPMSPTSVASSGHFPFTASEISGMGVDTSALDTAFTSDVASSVGLHLPPDNGTSRPFGHIPWNFSLSDLTADLSNLGDLGALGNYPGSPFLPSNSDILLDSPEQEDIVEEFFADSVPGPPCSNSDEEKS 375
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00239 375 PANTHER OS02G0137100 PROTEIN 58 339 IPR006476 -
Sain12g00239 375 Pfam Plant protein 1589 of unknown function (A-thal-3526) 71 122 IPR006476 -
Sain12g00239 375 MobiDBLite consensus disorder prediction 1 62 - -
Sain12g00239 375 MobiDBLite consensus disorder prediction 1 59 - -
Sain12g00239 375 NCBIfam TIGR01589 domain 68 124 IPR006476 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00239 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
138682 Sain12g00239 Sain9g00086
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr12:4289958 Sain15g00423 Sain-Chr15:47169395 dispersed
Sain Sain-Chr12:4289958 Sain9g00086 Sain-Chr9:2225990 wgd