AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00284 ATGATCATGGGATCGTCTCTCAAACTCGCCGTAGTTTCTGCCACCGTCTTATCCACCGCCGTCATGGTCAAGCTTTTAGCACCCATAATTATGGATTTTTCAATCACGGATGTCCGTGCCATATGGTTCGCTCTCATCTCCTGGCTCAAACCGCCCTATCTTTACGTTGTCCTCAACTGTATAATCCTCACAATCGTTGCTTCTTCACGGTTACACTCCACCAAGGTTGGCGATTCTGATCATCCACCGCCGTCAACTTTTCCGTTACCGCCGTTTGAGCCTGCCGTTAAGGTCGTGCTTCCCGTTGAAGTACTACAGTTTCATCAACCTGAAGTACCGGAAGTACTGCCGTTTCACGGCGTTCTAAATGAACCGCCGGTGAAGGAGGCTGTCGCCGGTTATAACAGTGATCGGAACTTTGTTCAGGTTCCGGAGCGTGATTTGAGCACGGATGATTTCAGGGATGAAGATATGAAGACAGAGACGGAAGCTTATGAAGAAATCATGAAAAATATGGCGAATAAATCTGTAATCTCCACGTCTTCTTGGACGCCATCGAAAATAAGTCATGTAGATCTCTCCTTTCCGGCGGAGAAATTACCGGCTTCCGCTAGGTTCAACCACCGGAAACCTACCAAAGCCAGCTCCGAAGGTGGAAAAACGTTGGGAGTCGCGAAGCCAAAGCAACAAGACACGCTGGAAACCACGTGGAAGACAATAACCGAAGGTCGGTCAGTTCCATTAACGAGGCACCTCCGTAAATCCGACACGTGGGAGACCCACGGTCAAGGCCGTCGCACGCGCAACTCCTCCGAGGCCGTCGATCATCCTCCCGAAAGGATGACAAAATCCGAAAAACTCAGCCGGTCCGGCGGTTCAGGGAGGCTGAAAAAGGAACCGTCGTTGGGTCAGGAGGAGTTGAACCGGCGAGTAGAAGCATTCATAAAGAAATTTAACGAGGATATGAAATTGCAGAGACAAGAATCTTTGAATCAGTATATGGAGATGATTAATGGTGGGGCCCATTAA 1029 49.27 MIMGSSLKLAVVSATVLSTAVMVKLLAPIIMDFSITDVRAIWFALISWLKPPYLYVVLNCIILTIVASSRLHSTKVGDSDHPPPSTFPLPPFEPAVKVVLPVEVLQFHQPEVPEVLPFHGVLNEPPVKEAVAGYNSDRNFVQVPERDLSTDDFRDEDMKTETEAYEEIMKNMANKSVISTSSWTPSKISHVDLSFPAEKLPASARFNHRKPTKASSEGGKTLGVAKPKQQDTLETTWKTITEGRSVPLTRHLRKSDTWETHGQGRRTRNSSEAVDHPPERMTKSEKLSRSGGSGRLKKEPSLGQEELNRRVEAFIKKFNEDMKLQRQESLNQYMEMINGGAH 342
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00284 342 MobiDBLite consensus disorder prediction 228 243 - -
Sain12g00284 342 MobiDBLite consensus disorder prediction 247 304 - -
Sain12g00284 342 MobiDBLite consensus disorder prediction 205 304 - -
Sain12g00284 342 Pfam Domain of unknown function (DUF4408) 41 71 IPR025520 -
Sain12g00284 342 PANTHER COTTON FIBER (DUF761) 25 339 - -
Sain12g00284 342 Pfam Cotton fibre expressed protein 304 338 IPR008480 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00284 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr12:5044074 Sain1g01521 Sain-Chr1:102027289 dispersed
Sain Sain-Chr12:5044074 Sain9g02708 Sain-Chr9:165922571 transposed