Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00284 | ATGATCATGGGATCGTCTCTCAAACTCGCCGTAGTTTCTGCCACCGTCTTATCCACCGCCGTCATGGTCAAGCTTTTAGCACCCATAATTATGGATTTTTCAATCACGGATGTCCGTGCCATATGGTTCGCTCTCATCTCCTGGCTCAAACCGCCCTATCTTTACGTTGTCCTCAACTGTATAATCCTCACAATCGTTGCTTCTTCACGGTTACACTCCACCAAGGTTGGCGATTCTGATCATCCACCGCCGTCAACTTTTCCGTTACCGCCGTTTGAGCCTGCCGTTAAGGTCGTGCTTCCCGTTGAAGTACTACAGTTTCATCAACCTGAAGTACCGGAAGTACTGCCGTTTCACGGCGTTCTAAATGAACCGCCGGTGAAGGAGGCTGTCGCCGGTTATAACAGTGATCGGAACTTTGTTCAGGTTCCGGAGCGTGATTTGAGCACGGATGATTTCAGGGATGAAGATATGAAGACAGAGACGGAAGCTTATGAAGAAATCATGAAAAATATGGCGAATAAATCTGTAATCTCCACGTCTTCTTGGACGCCATCGAAAATAAGTCATGTAGATCTCTCCTTTCCGGCGGAGAAATTACCGGCTTCCGCTAGGTTCAACCACCGGAAACCTACCAAAGCCAGCTCCGAAGGTGGAAAAACGTTGGGAGTCGCGAAGCCAAAGCAACAAGACACGCTGGAAACCACGTGGAAGACAATAACCGAAGGTCGGTCAGTTCCATTAACGAGGCACCTCCGTAAATCCGACACGTGGGAGACCCACGGTCAAGGCCGTCGCACGCGCAACTCCTCCGAGGCCGTCGATCATCCTCCCGAAAGGATGACAAAATCCGAAAAACTCAGCCGGTCCGGCGGTTCAGGGAGGCTGAAAAAGGAACCGTCGTTGGGTCAGGAGGAGTTGAACCGGCGAGTAGAAGCATTCATAAAGAAATTTAACGAGGATATGAAATTGCAGAGACAAGAATCTTTGAATCAGTATATGGAGATGATTAATGGTGGGGCCCATTAA | 1029 | 49.27 | MIMGSSLKLAVVSATVLSTAVMVKLLAPIIMDFSITDVRAIWFALISWLKPPYLYVVLNCIILTIVASSRLHSTKVGDSDHPPPSTFPLPPFEPAVKVVLPVEVLQFHQPEVPEVLPFHGVLNEPPVKEAVAGYNSDRNFVQVPERDLSTDDFRDEDMKTETEAYEEIMKNMANKSVISTSSWTPSKISHVDLSFPAEKLPASARFNHRKPTKASSEGGKTLGVAKPKQQDTLETTWKTITEGRSVPLTRHLRKSDTWETHGQGRRTRNSSEAVDHPPERMTKSEKLSRSGGSGRLKKEPSLGQEELNRRVEAFIKKFNEDMKLQRQESLNQYMEMINGGAH | 342 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00284 | 342 | MobiDBLite | consensus disorder prediction | 228 | 243 | - | - | |
| Sain12g00284 | 342 | MobiDBLite | consensus disorder prediction | 247 | 304 | - | - | |
| Sain12g00284 | 342 | MobiDBLite | consensus disorder prediction | 205 | 304 | - | - | |
| Sain12g00284 | 342 | Pfam | Domain of unknown function (DUF4408) | 41 | 71 | IPR025520 | - | |
| Sain12g00284 | 342 | PANTHER | COTTON FIBER (DUF761) | 25 | 339 | - | - | |
| Sain12g00284 | 342 | Pfam | Cotton fibre expressed protein | 304 | 338 | IPR008480 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00284 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:5044074 | Sain1g01521 | Sain-Chr1:102027289 | dispersed | |
| Sain | Sain-Chr12:5044074 | Sain9g02708 | Sain-Chr9:165922571 | transposed |