Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sain12g00290	ATGGAGACCCCAATTTCAGATGTTAGGGTATCAAAGAGGTCGTTGAGAAAGAAATCCCTATCTAGAAACTATGATGAGAATTTGATGGATGACTATTTGGATAAGCAATTAGGTGGTTCTGTAAGGAAAAGGTTTAGGACAAAAAAGGAATTGGAGAAAGAAACTGAAAAAGAAGCCATGATAGCCCTTTCGTTAGGGTTTCCGATTGATGCGCTGCTTGAAGAAGAAATCAAAGCTAACGTAGTGAGTGAATTGGATGGGAAAGAGCAGAATGATTATATCGTGGTGAGAAACCATATACTTTCAAGATGGAGGGCTAATGTACAGGCATGGCTTTCTAAAGGACAGATAAAGGAAACTGTAAGTAATGAATACGACCACTTGCTGCATTCAGCTTATGATTTTCTTTTGTTTAATGGGTATATAAATTTTGGAGTTTCACCATCATTCAAGGCTCAGATGCCCGAGGAAGCAACTGAGGGATCTGTAATAATTGTGGGTGCAGGACTTGCTGGGTTAGCTGCGGCTCGCCAGCTGTTAGCCTTTGGTTTTAAGGTCATTGTCTTGGAAGGTAGGAACAGACCTGGGGGAAGAGTTTATACCCAGAAGATGGGTCAAAAGGGTAATTATGCTGCAGTTGATCTTGGTGGAAGTGTTATTACAGGCATCCATGCGAACCCACTTGGAGTTTTGGCTAGACAGCTTTCGATTCCTCTTCATAAAGTTAGAGATAAATGTCCCTTGTACAATCCAGAAGGGCAACCAGTTGCTAAGGAAATTGATTCCAAAGTAGAATTGATATTTAATAGGCTTCTAGACAAAGTTACCGAATTTAGACAAATCATGGGTGAATGTGCTGCTGATGATATTTCTTTGGGCTCAGTTCTCGAGAGGCTTAGACAGTTGTACACCGTGGCTACAAGTTCTGAGGAAAAACAATTACTCGACTGGCATTTTGCAAACTTAGAATATGCAAATGCGGGTTGTCTTTCACATCTCTCCGCTGCCTATTGGGATCAAGATGATCCTTACGAGATGGGTGGTGATCATTGCTTTCTTGCAGGTGGGAATTGGAGGTTAATAGAAGCATTATGTGAAGGGGTTCCCATTTTCTACGAAAAGATAGTTCAAACAGTTAGATACAGTAACGAGGGTGTTGAGGTGGTTGCTGGGGATCAAACGTACCAAGCAGACATGGTCTTATGCACCGTTCCTCTTGGTGTCTTAAAGAAAAAGACGATAAAATTCATACCAGAGTTACCTGAAAGAAAACTTGAGGCAATTGGAAAACTGGGATTTGGGCTGCTGAATAAGGTTGCTATGGTATTCCCTTGTGTCTTTTGGGGGGAAGATCTGGATACATTTGGCTGCCTTAGCAAGAATAGCAGTACCCGTGGAGAGTTTTTCTTGTTTTACAGTTATCATACTGTTTCCGGGGGATCGGTTCTTGTTGCATTGGTTGCTGGTGAAGCTGCAAGATCATTTGAATACACACATCCATCCACTTTGCTTCATCGTGTTTTAAGCATCCTCAGAGGTATATATGGTCCAAAGGGTATTGATGTACCTAATCCCATCCAATCTATTTGTACAAAATGGGGAAATGATCCCCTTTCTTATGGTTCATACTCTCATGTAAGGGTGCACTCTTCCGGTAGTGATTATGATATACTTGCAGAAAATGTGGAAAACCGCCTTTTCTTTGCTGGTGAAGCCACAAATCGCCAACACCCAGCCACCATGCATGGTGCTTACTTAAGTGGTTTAAGAGAAGCTTCATGCATTTATAGACTCACAAAGGGCAAGCAAACACAAACTCATCCTAAAAAGAGCATTCGAAAAAATGGTGGAGTGAGTGATATTCTCGTAAATCTTTTCAAGAAACCGGATTTAGCTTTTGGGAACCTACTTTTTGTATTTGACCCTTCAACCGACGACCCTAAATCAACGGGGCTTATGATGGTTGCTATCGATAGTTCCAGTAGTGAGTTATGTAACGATAATGGGAGGGTCAATATTAGTCAACATTCTGACAAGCAACCCATGAAGCTTTATACGATTGTATCGCGTGTACAGGCACAAGAGTTGCAATCTGAGATAGAACGTGGTGAGTGTGGATTGACATATTTGTCCAAAAATCTCGGGTTGAAACTAATGGGATCGGATTGTTTTACCCTCTTAGCGAATTCGTTGATTTCATACATTGCCACAAGAAGAGGCAGGCTTAGAAATCGGATTGTTTATGGAAACCGTGTTTCATACACATGA	2268	41.36	METPISDVRVSKRSLRKKSLSRNYDENLMDDYLDKQLGGSVRKRFRTKKELEKETEKEAMIALSLGFPIDALLEEEIKANVVSELDGKEQNDYIVVRNHILSRWRANVQAWLSKGQIKETVSNEYDHLLHSAYDFLLFNGYINFGVSPSFKAQMPEEATEGSVIIVGAGLAGLAAARQLLAFGFKVIVLEGRNRPGGRVYTQKMGQKGNYAAVDLGGSVITGIHANPLGVLARQLSIPLHKVRDKCPLYNPEGQPVAKEIDSKVELIFNRLLDKVTEFRQIMGECAADDISLGSVLERLRQLYTVATSSEEKQLLDWHFANLEYANAGCLSHLSAAYWDQDDPYEMGGDHCFLAGGNWRLIEALCEGVPIFYEKIVQTVRYSNEGVEVVAGDQTYQADMVLCTVPLGVLKKKTIKFIPELPERKLEAIGKLGFGLLNKVAMVFPCVFWGEDLDTFGCLSKNSSTRGEFFLFYSYHTVSGGSVLVALVAGEAARSFEYTHPSTLLHRVLSILRGIYGPKGIDVPNPIQSICTKWGNDPLSYGSYSHVRVHSSGSDYDILAENVENRLFFAGEATNRQHPATMHGAYLSGLREASCIYRLTKGKQTQTHPKKSIRKNGGVSDILVNLFKKPDLAFGNLLFVFDPSTDDPKSTGLMMVAIDSSSSELCNDNGRVNISQHSDKQPMKLYTIVSRVQAQELQSEIERGECGLTYLSKNLGLKLMGSDCFTLLANSLISYIATRRGRLRNRIVYGNRVSYT	755

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sain12g00290	755	ProSiteProfiles	SWIRM domain profile.	52	153	IPR007526	GO:0005515(InterPro)
	Sain12g00290	755	Gene3D	-	57	156	IPR036388	-
	Sain12g00290	755	SUPERFAMILY	Homeodomain-like	54	155	IPR009057	-
	Sain12g00290	755	FunFam	Lysine-specific histone demethylase 1A	57	157	-	-
	Sain12g00290	755	Pfam	Flavin containing amine oxidoreductase	170	595	IPR002937	GO:0016491(InterPro)
	Sain12g00290	755	SUPERFAMILY	FAD-NAD(P)-binding domain	159	598	IPR036188	-
	Sain12g00290	755	Gene3D	-	245	551	-	-
	Sain12g00290	755	Gene3D	-	163	593	IPR036188	-
	Sain12g00290	755	PANTHER	FLAVIN MONOAMINE OXIDASE	66	597	IPR050281	GO:0016491(PANTHER)
	Sain12g00290	755	SUPERFAMILY	FAD-linked reductases, C-terminal domain	432	544	-	-
	Sain12g00290	755	Pfam	SWIRM domain	73	144	IPR007526	GO:0005515(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sain12g00290	K11450	[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:1.14.99.66]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Sain	Sain-Chr12:5155373	Sain4g01315	Sain-Chr4:39922886	dispersed

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Sain	Amino_oxidase	1.2e-92	CL0063		TR	SWI/SNF-SWI3