Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00295 | ATGGAGGGTATTGATGCTAACAAGTATGCTAAAGAATTAGAAGTGGGTGTTCGAGTTGTACAACTGGCATGTTCTCTGTGCCAGAAGGTGCAAAAGGGTTCGGTTGGTCCCAACCCTGATCAGGTCATTTCAAAAGACGACGATTCACCTGTTACTGTCGCCGATTGGAGTGTACAAGCAACGATTAGCTGGATATTATCCGAATCATTTGGTAGAGAAAACGTCTCGATTGTTGCTGAAGAAGACGCTCAAACACTCTCCGATGCCAATGCCACAAGTTTACTAGCATCCGTGGTTGCAACCGTGAACGAAAGTTTGGCTATAGCACCCAGGTTCGGTCTCAAGAGCCCAGCCGCACCCCTTGGGGCTTCAGAAGTTCTTGATGCCATAAGCCGATGCAATTCAACCGGGGGCCCAGTGGGCCGCCATTGGGTCCTTGACCCTGTTGATGGAACTTTAGGGTTCGTGCGTGGAGACCAGTATGCCGTGGCTCTGGCTTTTATTGAAAACGGGCAGGTTATGGTTGGAGTTCTTGGGTGCCCGAATTATTCGAGTAAAAAGAAATTGGTGAATAATTCAAGTAATTTGAAATTATCGTCGGATTTGTGGCAAGAAGGGTGTGTTATGTACACGAGAAAAGGTAGTGGTCAAGCTTGGATGCAGCCGTTGGTTCATGGTGACGGGGTCTTGGAGTGGCCCAACTCGGCTAGCGTTATAAGGGTTTCTTCCATTGATAACCCTGCAATGGCTACGTTTTGTGAACCGGTGGAGAAAGCCAACTCAAACCATTCTTACACTGCTGGACTCGCGTATAGTTTAGGACTTAGAAAGCAGCCGTTGCGTGTGTATAGCATGGTGAAATACGCGGCAATAGCGCGTGGGGATGCGGAGATATACATGAAGTTTGCAAAGGCTGGATACAAGGAGAAGATATGGGATCATGCTGCTGGTGTGGTGATTGTGGAGGAGGCTGGCGGAGTTGTGACGGATGCTGGTGGTCGGCCACTGGATTTCTCGAGAGGGGTGTATCTTGAAGGTGTTGATAGGGGGATCGTTGCGTGTTCTGGGGTGAATTTGCATGAGAAAATTGTTGGGGCTGTTTATGCAAGCTGGGATTCCTCTCACCTTTGA | 1131 | 48.72 | MEGIDANKYAKELEVGVRVVQLACSLCQKVQKGSVGPNPDQVISKDDDSPVTVADWSVQATISWILSESFGRENVSIVAEEDAQTLSDANATSLLASVVATVNESLAIAPRFGLKSPAAPLGASEVLDAISRCNSTGGPVGRHWVLDPVDGTLGFVRGDQYAVALAFIENGQVMVGVLGCPNYSSKKKLVNNSSNLKLSSDLWQEGCVMYTRKGSGQAWMQPLVHGDGVLEWPNSASVIRVSSIDNPAMATFCEPVEKANSNHSYTAGLAYSLGLRKQPLRVYSMVKYAAIARGDAEIYMKFAKAGYKEKIWDHAAGVVIVEEAGGVVTDAGGRPLDFSRGVYLEGVDRGIVACSGVNLHEKIVGAVYASWDSSHL | 376 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00295 | 376 | PRINTS | Inositol monophosphatase superfamily signature | 309 | 333 | IPR000760 | - | |
| Sain12g00295 | 376 | PRINTS | Inositol monophosphatase superfamily signature | 144 | 160 | IPR000760 | - | |
| Sain12g00295 | 376 | ProSitePatterns | Inositol monophosphatase family signature 1. | 144 | 157 | IPR020583 | - | |
| Sain12g00295 | 376 | FunFam | PAP-specific phosphatase HAL2-like | 240 | 373 | - | - | |
| Sain12g00295 | 376 | Pfam | Inositol monophosphatase family | 48 | 367 | IPR000760 | - | |
| Sain12g00295 | 376 | NCBIfam | 3'(2'),5'-bisphosphate nucleotidase | 9 | 374 | IPR006239 | GO:0006790(InterPro)|GO:0008441(InterPro) | |
| Sain12g00295 | 376 | ProSitePatterns | Inositol monophosphatase family signature 2. | 312 | 326 | IPR020550 | GO:0046854(InterPro) | |
| Sain12g00295 | 376 | PANTHER | PHOSPHATASE | 6 | 372 | IPR051090 | GO:0000103(PANTHER)|GO:0008441(PANTHER)|GO:0042578(PANTHER) | |
| Sain12g00295 | 376 | Gene3D | - | 240 | 370 | - | - | |
| Sain12g00295 | 376 | Gene3D | - | 7 | 229 | - | - | |
| Sain12g00295 | 376 | SUPERFAMILY | Carbohydrate phosphatase | 9 | 369 | - | - | |
| Sain12g00295 | 376 | CDD | PAP-phosphatase | 12 | 369 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00295 | K01082 | 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:5325413 | Sain9g02729 | Sain-Chr9:166548712 | dispersed | |
| Sain | Sain-Chr12:5325413 | Sain12g00297 | Sain-Chr12:5411962 | proximal |