AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00330 ATGGAGATCGTCTCAAGACAACACGATAGCGAAAACCCATCTCCGGCCAACTCTCCTTCCAGCAACGGCAGCAGTAGCAACAGCAATGGACATGCCGCCGGCGCCGCCGTCCAAACACCACCACTAACTCCAAGACCCGTTTCAAGATCCGAACCAAATCCATACCCAACCACCTTCGTCCAAGCCGATACCACTTCCTTCAAAAAAGTAGTCCAGATGCTAACCGGATCATCCAACCCGACCCGACAACCCGATCCGACTCCATCCAAGATTTCCATTCCGCCGGTCAAAACCGGTCAACAGAAGAAACAAGGTTTCAAGCTCTACGAACGTCGGAACAGCCTGAAAAACGGGCTCATGATTAACCCGTCGGTGCCGAAGTCCGGCAACGGCCATGGATTATCGCCGAGATTCCATGAAATACTTTCGCCGAGCATTCTTGATTTTCCGGCGCTCGTTCTTAGTCCGGTGACGCCGTTGATCGTAGACCCGTTCAATAAATCGTCACCGTCGATTGGGAATTCGTCGGAGGAAGAAAGGGTAATTGCACAAAAAGGGTTTTATTTGCATCCGTCGCCTAGGGCGGCGACGCCACATGGGACGGCGGAGCCACAGCTATTGCCTCTTTTTCCGGTGACGTCGCCGCGGGTATCGGAATCGTCGATTTAG 669 53.21 MEIVSRQHDSENPSPANSPSSNGSSSNSNGHAAGAAVQTPPLTPRPVSRSEPNPYPTTFVQADTTSFKKVVQMLTGSSNPTRQPDPTPSKISIPPVKTGQQKKQGFKLYERRNSLKNGLMINPSVPKSGNGHGLSPRFHEILSPSILDFPALVLSPVTPLIVDPFNKSSPSIGNSSEEERVIAQKGFYLHPSPRAATPHGTAEPQLLPLFPVTSPRVSESSI 222
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00330 222 MobiDBLite consensus disorder prediction 52 86 - -
Sain12g00330 222 MobiDBLite consensus disorder prediction 1 103 - -
Sain12g00330 222 Pfam VQ motif 54 78 IPR008889 -
Sain12g00330 222 MobiDBLite consensus disorder prediction 8 34 - -
Sain12g00330 222 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 23 218 IPR039611 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00330 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
138693 Sain12g00330 Sain13g02448
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr12:6025168 Sain9g02809 Sain-Chr9:171078628 dispersed
Sain Sain-Chr12:6025168 Sain13g02448 Sain-Chr13:134158577 wgd