AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00338 ATGTCGATGATGTTGGCTTCTTTTCGTAGTCATTTCTTCAAACACTTGGTGTGCACTTCCTTCTCGTCGATTCCAACCACTTCAAAGCTCACTCGTGGATCCACTTCTATGTTAATCAGTTCCACAAGTAATTACCCATCAAGAAAGTGGACAGAATTCTTGAATTCCAATCCAATTACTGCAGCATTCTCTACATCTTCTTCTCCAGCTCCTGAAAATTCCACCACTGGTTCATACTTATCTGTCGACATACAATGTCGTCAAGATGTTGCAGATATGCTTTCAGAGGCGCTTTTATGTTTTGGTGCTGTTTCCACAAGCATGGTTGAACCAGATACCTGCAACTCCAATGATGAGATCTCCATTGGTTCCATATTTACTGTAAATCAAGATGTGCATCGAAGTATTTCGCAGGCAGCTGACTCCATAGGCTTGAAAGAAACACCTGTTTACAAAGTCACAATCGGTTACCAATCCGATTGGATTGAAAATTCTAGGGAATCTTTCCATCCCATTGAAGTTATGGAAGGACTTTGGATTGTGCCCGAGTGGATAACTCCCCCGGATCTTGAAGCAACAATTATAAGTTTGAACCCTGGGCTGGCATTTGGAACTGGAGACCACCCTACTACCAAGTTATGTCTCTTGTTATTACATGGTTTAATCAAAGGTGGAGAAAAAGTTTTGGATTACGGCACGGGTTCCGGGATTCTTGCAATTGCAGCGCTAAAGTTTGGTGCAGCCTCATCAGCAGGGTTGGATATAGATCCTCAAGCTATCACAGCTGCACGACATAATGCCGATCTGAACAACATAGCCCCCGACAAATTGCAATTGCATCTTGTTCCTAATAACACCAATCCTTTGTCAACAGACCAATGGCAATGGGCAGCCAAGGGTAACGACATTGATTTAAATGGCGTGGAAATGATCCCTGAGAAAGACGAGTATGATGTGGTTGTTGCAAACATTCTTTTGAACCCTTTGCTAGATTTGGCAGATCAGATTGTTTCTTATGCCAAGCCTGGTGCTGTAGTAGCTGTTTCTGGTATTATATTGGACCAGGTACCAACCGTTGTAGATCGATACTCGAATCTTTTGGAAGGCATGACTGTGTCGGAGATCGATGATTGGGCTTGCATAAGTGGCACAAAGAGGAAGGTGAAGGAGTAG 1173 43.14 MSMMLASFRSHFFKHLVCTSFSSIPTTSKLTRGSTSMLISSTSNYPSRKWTEFLNSNPITAAFSTSSSPAPENSTTGSYLSVDIQCRQDVADMLSEALLCFGAVSTSMVEPDTCNSNDEISIGSIFTVNQDVHRSISQAADSIGLKETPVYKVTIGYQSDWIENSRESFHPIEVMEGLWIVPEWITPPDLEATIISLNPGLAFGTGDHPTTKLCLLLLHGLIKGGEKVLDYGTGSGILAIAALKFGAASSAGLDIDPQAITAARHNADLNNIAPDKLQLHLVPNNTNPLSTDQWQWAAKGNDIDLNGVEMIPEKDEYDVVVANILLNPLLDLADQIVSYAKPGAVVAVSGIILDQVPTVVDRYSNLLEGMTVSEIDDWACISGTKRKVKE 390
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00338 390 Gene3D Vaccinia Virus protein VP39 168 389 IPR029063 -
Sain12g00338 390 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 149 378 IPR029063 -
Sain12g00338 390 PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE 79 386 IPR050078 GO:0005739(PANTHER)|GO:0008276(PANTHER)
Sain12g00338 390 Hamap Ribosomal protein L11 methyltransferase [prmA]. 77 385 IPR004498 GO:0006479(InterPro)|GO:0008276(InterPro)
Sain12g00338 390 CDD AdoMet-MTases 227 353 - -
Sain12g00338 390 Pfam Ribosomal protein L11 methyltransferase (PrmA) 79 385 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00338 K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]