Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00356 | ATGCTCTGTCTACCTCTCCGCTCTATATCTCCTCACCCCAAAATTCCTGTTGGATCCCAAACCCAAGCGTTCAGATTCTTGTCAACAACCCATTTTGTTCATCTTCATCAGCGTCGTAAATATTCAAACAATATTGTTCACAGGAGTTATGAGTATAGTTCTTGTCCTTGTTCGAATTCGGACACGGGTTCTTTCAATTCGAGCGAAGAAGAATTCGATATGGAATTGGGACGCTTGTTGAGGCTGTTGCCGGAGGAGATGCGGCGGAGGGTTAACGAACATCAAGAACTTCACCAACTGATTGAGGTCGTTATGGATTTGGGTCGGAAACCCTTGGCTCGATTTCCTTCTGGAGATTTCGTCTTGTCGGATCATTTGATCACGGTGGATGATCTTTTACACGCTACTTCATTGGTAGGTGATTTTGCTATTGACAATCGGGCTGGCATTAGCAGAACTTTGCACCGAATTAGTGCCATCAGAAACCGCAAGGCCGCAATTATTGGGCTAACCTGTCGTGTTGGCCGAGCTGTATCAGGAAGTGCCAAATTATTGCAAGATTTGGTTAAAGATGGATCCTCTTTATTGCTTATTGGACCTCCAGGAGTTGGAAAAACTACAATTATCAGGGACATAGCTCGAATGCTTGCAAATGACTATAAGAAACGTGTCATGATTGTTGACACCTCAAATGAAATCGGTGGAGACGGTGATATACCTCACGCAGGTATAGGTAATGCTCGACGGATGCAAGTTCCTGATTCTGATATGCAACATAAGGTGTTAATAGAAGCAGTCGAAAATCATATGCCTCAAGTGATTGTAATTGATGAAATCGGCACAAAACTTGAAGCAGCAGCTGCAAGCACTATTGCACAACGTGGGATTCAGTTAGTTGCAACTGCTCATGGTATTACAATAGAGAATTTAGTGATGAATCCTTCGTTAGAGATGCTTGTTGGAGGAATACAAAGTGTGACACTAGGAGATGAAGAGGCAAATCGAAGGGGTGTACAGAAATCAGTGCTGGAGAGAAAAGGTCCATCTACTTTTGATTGTGCGGTGGAGATCATTTCTAGGGTTGAGTTGAGAGTTCATAGTAGCCTCGAAGCAACAGTTGATGCTATTCTTTCTGGCCGTTCCCCGAAATATCAAGTTTGCAAGTTAAATCAGGGAGAGGTAGATGTTACTCTACAAAATGACCCAAGGGCACACGAGTCATTTGTCAAGAAGAGCGTTACCACAATTGAAGGCATCCCACATTGGACTGATGAAAAGCTTATATCTGATAAACACATTTCTAAAGAGTCGCAAAGTGACGAAGAGAATTCTTACGATAAGCCACCCTTGTGTTTATTTCTCTATGGGGTATCAGAGACATGTGCGATACAAGTATTCAAAAATTTAAAGATGGACTCTGCTATTGAATTTACGGAGAATATTAGTGAAGCAGATGCAATACTTGCACTACTGTCCAAAATAAGGAAAAATTCTCGGATTCAGGCTGCTGCTCACTCTAATGACATACCTATTTATGTGACAAAGACAAGCTCGTTGACGCAGTTAACAAAGGCCATAGAGGCATTAGTGACCGATTATGATAATGGTTTTGAAGATAATGAAGATGAAACTCAGATAAATGAATCAGAAAAGACTGATGCTTTGGAGGAGGTGAGAATTGCTATTGAGCAGGTTGTAATCCCAAAAGGGCAACCTGTAGAATTACTTCCTAGGCCATCCAGCATTATGTTGCTTCAGAAAGATCTCATTCGTAAATACAAGCTACAAGCACAGCAAATTGGTTCAGAGGTAGATGTAAGGCTTCGTATCCTACCATTTCAAGGTAACAAACAAGATAAAGATCCTGGTGAAACAAGTGATGACCATGATGATGATGATGGTGAAATTAGTGAGTTATCTGAAACAAATGGTTCAGCCTACCCAATGGATAGGTTGCCTTTCTTGCCTGACTAA | 1974 | 41.59 | MLCLPLRSISPHPKIPVGSQTQAFRFLSTTHFVHLHQRRKYSNNIVHRSYEYSSCPCSNSDTGSFNSSEEEFDMELGRLLRLLPEEMRRRVNEHQELHQLIEVVMDLGRKPLARFPSGDFVLSDHLITVDDLLHATSLVGDFAIDNRAGISRTLHRISAIRNRKAAIIGLTCRVGRAVSGSAKLLQDLVKDGSSLLLIGPPGVGKTTIIRDIARMLANDYKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPDSDMQHKVLIEAVENHMPQVIVIDEIGTKLEAAAASTIAQRGIQLVATAHGITIENLVMNPSLEMLVGGIQSVTLGDEEANRRGVQKSVLERKGPSTFDCAVEIISRVELRVHSSLEATVDAILSGRSPKYQVCKLNQGEVDVTLQNDPRAHESFVKKSVTTIEGIPHWTDEKLISDKHISKESQSDEENSYDKPPLCLFLYGVSETCAIQVFKNLKMDSAIEFTENISEADAILALLSKIRKNSRIQAAAHSNDIPIYVTKTSSLTQLTKAIEALVTDYDNGFEDNEDETQINESEKTDALEEVRIAIEQVVIPKGQPVELLPRPSSIMLLQKDLIRKYKLQAQQIGSEVDVRLRILPFQGNKQDKDPGETSDDHDDDDGEISELSETNGSAYPMDRLPFLPD | 657 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00356 | 657 | PANTHER | KINASE-RELATED | 57 | 575 | - | GO:0009507(PANTHER) | |
| Sain12g00356 | 657 | PRINTS | Endopeptidase La (Lon) serine protease (S16) signature | 600 | 619 | - | - | |
| Sain12g00356 | 657 | PRINTS | Endopeptidase La (Lon) serine protease (S16) signature | 199 | 218 | - | - | |
| Sain12g00356 | 657 | FunFam | uncharacterized protein ycf45 isoform X2 | 156 | 373 | - | - | |
| Sain12g00356 | 657 | Gene3D | - | 172 | 336 | IPR027417 | - | |
| Sain12g00356 | 657 | Pfam | Sporulation stage III, protein AA | 167 | 321 | IPR045735 | - | |
| Sain12g00356 | 657 | CDD | R3H-AAA | 553 | 612 | IPR034081 | - | |
| Sain12g00356 | 657 | SMART | AAA-5 | 191 | 322 | IPR003593 | GO:0016887(InterPro) | |
| Sain12g00356 | 657 | CDD | AAA | 192 | 281 | - | - | |
| Sain12g00356 | 657 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 73 | 334 | IPR027417 | - | |
| Sain12g00356 | 657 | MobiDBLite | consensus disorder prediction | 614 | 657 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00356 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:6632060 | Sain8g01374 | Sain-Chr8:53651504 | dispersed |