Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00366 | ATGGCGGATGAAAAAGAGGTAAAGGAAGTGGTTGAAGAGAAGAATGATAAAAAGAGTAAGAACAAGAAGGGGATTTTTTCTCGAATCTGGAATACAGTGTTTAGGTCAGGCAGTAACGATTTTGAGAAGAGATTGCAGTATATATCTAAAGAAGAGGCAACTCTTCTATCTAGAATGAAGAGGAGAGCCTTGAGATGGAGGAGAACAGCAAGGAATTTAATTATCTTTTCTGTTATTCTTGAGTTGGTTGCAGTGGGTTATGCTATAATGACAACAAGAACAGTGGACATGGACTGGAGAACGAGATCATTGCGTGTTTTACCCATGTTTCTTTTGCCTGGTTTATCATTCGCTTTGTATTATGGACTTTTGAGCTTCACGAAATTTTGTGATCATAGGGATCAGAAAGCATTGGAGAGGCTTCGGGATGAAAGGCAAGCAAAAATTGACGAGCTTAAAGAGAGGACGAATTACTACATGACTCAGCAACTCATTCAGAAATACGACCCTGATCCAGCAGCAAAAGCAGCTGCTGCATCGGTCCTTGCATCTAAATTGGGTGCAGATTCAGGGCTGAAAATGTTTCTTGGAGACGAATCACAACTGAACCCGCATGGCACAGGGAAGAGCAGCGATGTTGAGCTTCAACAATCCAGTGGTCTCCGGAAACGAAATCAATCAAATGGTAGATCTACCGGAGGCAATGTAGCCCAACAGCACTCTGATAAAGAAATGATTCAGTATGCAGGAAATGAAGTTTCAGAGAATTCTGCGCATAGCCAGCTTGTAGTTGAGCATCATAATCCCGCAGCTTTAGGTGCTCAAGATGGTGGTTGGATTGCTCGAATTGCCGCCTTGCTGGTGGGAGACGACCCTGCACAATCATATGCACTTATATGCGGCAATTGTCATATGCATAATGGTCTTGCAAGAAAGGAGGAATTCCCGTTCACCACTTACTATTGTCCCCATTGCCATGCCCTGAATAAACCCAAGAACTCGGACACACTTTCTTCAGATATTATGTCAACCGGTTCAGGATCTCCATTGACAGCAAGTGCAGATGGTAACGTGGTTGACCAAAAAATTGGGTCAATGGATCAAAAGGTATCTGGTAGCAGCAGTCCGGTGGAAGCGAGAGAGAAAATAGTGGCGGAGGATCCTGGCGTGGAAGAGAGTGAGAAAAAAGTGGCGGTGGAAGAAAGAGAAGCGAGTGAGAAAATAGTGGGGGAGGATACCACTGGTCATTAG | 1251 | 43.96 | MADEKEVKEVVEEKNDKKSKNKKGIFSRIWNTVFRSGSNDFEKRLQYISKEEATLLSRMKRRALRWRRTARNLIIFSVILELVAVGYAIMTTRTVDMDWRTRSLRVLPMFLLPGLSFALYYGLLSFTKFCDHRDQKALERLRDERQAKIDELKERTNYYMTQQLIQKYDPDPAAKAAAASVLASKLGADSGLKMFLGDESQLNPHGTGKSSDVELQQSSGLRKRNQSNGRSTGGNVAQQHSDKEMIQYAGNEVSENSAHSQLVVEHHNPAALGAQDGGWIARIAALLVGDDPAQSYALICGNCHMHNGLARKEEFPFTTYYCPHCHALNKPKNSDTLSSDIMSTGSGSPLTASADGNVVDQKIGSMDQKVSGSSSPVEAREKIVAEDPGVEESEKKVAVEEREASEKIVGEDTTGH | 416 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00366 | 416 | MobiDBLite | consensus disorder prediction | 365 | 416 | - | - | |
| Sain12g00366 | 416 | PANTHER | ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK | 18 | 400 | IPR040115 | GO:0071782(PANTHER)|GO:0071786(PANTHER)|GO:0071786(InterPro) | |
| Sain12g00366 | 416 | MobiDBLite | consensus disorder prediction | 197 | 240 | - | - | |
| Sain12g00366 | 416 | Coils | Coil | 135 | 155 | - | - | |
| Sain12g00366 | 416 | Pfam | Predicted integral membrane zinc-ribbon metal-binding protein | 279 | 329 | IPR019273 | - | |
| Sain12g00366 | 416 | MobiDBLite | consensus disorder prediction | 203 | 240 | - | - | |
| Sain12g00366 | 416 | MobiDBLite | consensus disorder prediction | 380 | 416 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00366 | K23292 | endoplasmic reticulum junction formation protein lunapark |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 138713 | Sain12g00366 | Sain13g02402 | |
| 138714 | Sain12g00366 | Sain3g00017 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:6953260 | Sain13g02402 | Sain-Chr13:133169833 | wgd | |
| Sain | Sain-Chr12:6953260 | Sain3g00017 | Sain-Chr3:530745 | wgd |