Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00371 | ATGGCGGCTTCTGCTGAACGCGAGAACTTCATCTATGTCGCTAAGCTCGCCGAACAAGCTGAACGATATGACGAGATGGTGGATGCCATGAAGAAGGTAGCAAAGTTAGATATCGAATTAACTGTTGAAGAAAGAAATTTGCTCTCTGTTGGATACAAGAATGTGGTGGGTTCACGTAGGGCATCATGGAGGATATTGTCCTCCATTGAGCAAAAAGAGGAGTCTAGAGGCAATGAAGTGAATGTAAAGCGGATTAAGGAATATAGGCAGAAGGTGGAAACAGAGCTGTCTAACATTTGCGGTGATATCATGACTGTGATTGATGAGCATCTGATTCCATCGTCCTCTGCTGGAGAATCTACCGTCTTCTACTACAAAATGAAGGGAGACTATTATAGGTATCTTGCAGAGTTCAAGTTTGGTAATGATAAAAAAGAGGCAGCTGATCAGTCACTGAAGGCGTATCAATTGGCTTCTACTGCTGCGGAGGATTTATCTCCTACCCATCCCATCCGATTGGGTTTGGCTTTGAACTTCTCTGTTTTCTATTATGAGATCATGAACTCTCCCGAAAGAGCCTGCCACCTGGCGAAACAAGCTTTTGATGAAGCTATCTCAGAGCTTGACTCCCTGAGTGAGGAGTCATACAAAGATAGCACCTTAATCATGCAGCTGCTGAGGGACAACCTCACTTTGTGGACTTCTGACATTCCAGAGGATGGAGAAGACCAAAAGATGGAGATCACCAAATCTGGTGCAGAAGAGGCAGAGTAA | 774 | 44.44 | MAASAERENFIYVAKLAEQAERYDEMVDAMKKVAKLDIELTVEERNLLSVGYKNVVGSRRASWRILSSIEQKEESRGNEVNVKRIKEYRQKVETELSNICGDIMTVIDEHLIPSSSAGESTVFYYKMKGDYYRYLAEFKFGNDKKEAADQSLKAYQLASTAAEDLSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDQKMEITKSGAEEAE | 257 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00371 | 257 | SUPERFAMILY | 14-3-3 protein | 6 | 236 | IPR036815 | - | |
| Sain12g00371 | 257 | MobiDBLite | consensus disorder prediction | 236 | 257 | - | - | |
| Sain12g00371 | 257 | ProSitePatterns | 14-3-3 proteins signature 1. | 45 | 55 | IPR023409 | - | |
| Sain12g00371 | 257 | PIRSF | 14-3-3 | 1 | 246 | IPR000308 | - | |
| Sain12g00371 | 257 | FunFam | 14-3-3 protein epsilon | 2 | 247 | - | - | |
| Sain12g00371 | 257 | Coils | Coil | 194 | 214 | - | - | |
| Sain12g00371 | 257 | PRINTS | 14-3-3 protein zeta signature | 88 | 112 | IPR000308 | - | |
| Sain12g00371 | 257 | PRINTS | 14-3-3 protein zeta signature | 39 | 68 | IPR000308 | - | |
| Sain12g00371 | 257 | PRINTS | 14-3-3 protein zeta signature | 119 | 141 | IPR000308 | - | |
| Sain12g00371 | 257 | PRINTS | 14-3-3 protein zeta signature | 153 | 179 | IPR000308 | - | |
| Sain12g00371 | 257 | PRINTS | 14-3-3 protein zeta signature | 207 | 236 | IPR000308 | - | |
| Sain12g00371 | 257 | PRINTS | 14-3-3 protein zeta signature | 180 | 206 | IPR000308 | - | |
| Sain12g00371 | 257 | ProSitePatterns | 14-3-3 proteins signature 2. | 216 | 235 | IPR023409 | - | |
| Sain12g00371 | 257 | Gene3D | - | 1 | 249 | IPR036815 | - | |
| Sain12g00371 | 257 | MobiDBLite | consensus disorder prediction | 238 | 257 | - | - | |
| Sain12g00371 | 257 | PANTHER | 14-3-3 PROTEIN | 6 | 239 | IPR000308 | GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER) | |
| Sain12g00371 | 257 | SMART | 1433-4 | 7 | 247 | IPR023410 | - | |
| Sain12g00371 | 257 | Pfam | 14-3-3 protein | 14 | 234 | IPR023410 | - | |
| Sain12g00371 | 257 | Coils | Coil | 13 | 33 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00371 | K06630 | 14-3-3 protein epsilon |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 138719 | Sain12g00371 | Sain13g02397 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:7185939 | Sain4g00790 | Sain-Chr4:22096901 | dispersed | |
| Sain | Sain-Chr12:7185939 | Sain13g02397 | Sain-Chr13:133043731 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Sain4g00790 | ACH | 6 | 256 | 14-3-3 family | AT1G26480 | 86.508 | 7.16e-164 | 452.0 | |
| Sain5g00697 | . | 2 | 256 | 14-3-3 family | AT1G78300 | 87.5 | 8.26e-164 | 452.0 | |
| Sain5g01069 | . | 3 | 254 | 14-3-3 family | AT3G02520 | 89.286 | 1.38e-167 | 462.0 | |
| Sain6g01623 | ACH | 5 | 247 | 14-3-3 family | AT5G10450 | 86.42 | 9.99e-159 | 439.0 | |
| Sain6g01687 | ACH | 3 | 259 | 14-3-3 family | AT1G78300 | 89.494 | 1.32e-170 | 469.0 | |
| Sain8g01545 | ACH | 4 | 247 | 14-3-3 family | AT5G65430 | 86.066 | 9.97e-160 | 441.0 | |
| Sain9g01777 | ACH | 7 | 266 | 14-3-3 family | AT1G35160 | 86.26 | 6.55e-169 | 465.0 | |
| Sain9g01804 | . | 2 | 245 | 14-3-3 family | AT1G34760 | 76.113 | 3.29e-139 | 389.0 | |
| Sain9g04114 | ACH | 6 | 264 | 14-3-3 family | AT1G26480 | 83.012 | 3.04e-160 | 443.0 | |
| Sain11g02688 | . | 2 | 256 | 14-3-3 family | AT1G78300 | 86.719 | 2.67e-163 | 451.0 | |
| Sain12g00371 | ACH | 1 | 263 | 14-3-3 family | AT2G42590 | 76.426 | 3.91e-149 | 415.0 | |
| Sain13g02397 | ACH | 1 | 263 | 14-3-3 family | AT2G42590 | 76.806 | 1.05e-150 | 419.0 | |
| Sain10000549.1g00003 | . | 6 | 256 | 14-3-3 family | AT1G26480 | 83.665 | 1.72e-159 | 441.0 |