Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00375 | ATGGCTTCCATTTCACTCCTTTTCTTCATCTCCTTTCAAATTCTTTCTTCCATCTCTCAAGCAATCGTGCCAGCTTCCGACACATTCACGTACGTAAACGAAGGCGATTTCGGAGATTACATAGTCGAATACGACGCCAATTATCGAGCTCATCCCCCTTTCAATAACCCATTCCAACTTTGCTTCTATAACACCACCCCAAATGCATTCACTCTAGCTCTACGTATGGGTACAACCCGATCTGAATCCCTCATGCGATGGGTTTGGGAAGCGAACCGCGGAAACCCGGTTCGCGAAAACGCCACCCTCACTTTCGGTACCGACGGAAATCTCGTACTAGCCGACGCCGACGGCAAGATTGCATGGCAAACCAACACCTCTAACAAAGGTGTGGTTGGTTTTCAAGTGCTTCCAAATGGTAACATGGTGCTTCGTGACGCTAAGGGTAATTTCATATGGCAAAGCTTTGATTCACCAACCGATACTCTTTTAGTGGGACAATATCTCCGAGCCGATGGTCCGAGTCGACTCGTGAGTCGGAGTTCCGAGGTGAATAATGTCGATGGAGCATACAGTTTAGTGATGGAGCCAAAAGGGTTAGCCATGTATTACAAGAGCCCGAATTCGGTTCGTCCGATGCTGTATTGGACATCGATCGAATGGTTCACTATTGACAAGGGTAGTTTGGACAATTTAACTATTACTTCCGAGCCGAATTCGGATGAGGGGTTTTGTAACACCCGTAAATTTCGGATAAGTACAATTTCGAATCAATGTGAAACCGGTCTTTGA | 792 | 46.34 | MASISLLFFISFQILSSISQAIVPASDTFTYVNEGDFGDYIVEYDANYRAHPPFNNPFQLCFYNTTPNAFTLALRMGTTRSESLMRWVWEANRGNPVRENATLTFGTDGNLVLADADGKIAWQTNTSNKGVVGFQVLPNGNMVLRDAKGNFIWQSFDSPTDTLLVGQYLRADGPSRLVSRSSEVNNVDGAYSLVMEPKGLAMYYKSPNSVRPMLYWTSIEWFTIDKGSLDNLTITSEPNSDEGFCNTRKFRISTISNQCETGL | 263 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00375 | 263 | SMART | blect-4 | 42 | 159 | IPR001480 | - | |
| Sain12g00375 | 263 | CDD | B-lectin | 54 | 159 | IPR001480 | - | |
| Sain12g00375 | 263 | Gene3D | - | 25 | 157 | IPR036426 | - | |
| Sain12g00375 | 263 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 67 | 207 | IPR036426 | - | |
| Sain12g00375 | 263 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 52 | 232 | IPR051343 | - | |
| Sain12g00375 | 263 | FunFam | Os04g0303100 protein | 78 | 211 | - | - | |
| Sain12g00375 | 263 | Pfam | D-mannose binding lectin | 88 | 172 | IPR001480 | - | |
| Sain12g00375 | 263 | ProSiteProfiles | Bulb-type lectin domain profile. | 26 | 157 | IPR001480 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00375 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:7267059 | Sain12g00378 | Sain-Chr12:7322835 | dispersed | |
| Sain | Sain-Chr12:7267059 | Sain12g00376 | Sain-Chr12:7281515 | tandem |