Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00378 | ATGGCGGCTACTACTTCTCTTTTCCTCATCTTCTTTTCCTTCCTCTTATTCATCTCCCAAGCCACTGTTCCTCCCTCCGACACCTTCCGATACGTAAACTCCGGCCCATACGGAGATTCCGACGAAGTCTCCACCGAATACGACCCAACCTACCGCCCTCTTCCGCCCTTCACTTCCCCTTTCCAACTCTGTTTCTACAATACCACCCCCAATGCCTACACTCTCAGTCTTCGCATGGGTACCAGACGTTCAAGATCCCTCATGCGTTGGGTCTGGGAAGCCAACCGCGGAAAACCCGTTCGCGAAAACGCCACTTTCTCATTCAGCACCGACGGAAACCTGGTCTTAGCCGATTCAGACGGCCGGATTGTATGGCAAACCAACACCGCCAATAAGGGTGTCGTTGGATTCCAAATCCTCCCAACCGGTAACATGGTGCTTCATGACGCTAACGGTAATTTCATCTGGCAAAGCTTTGATTCGCCAACTGATACCCTCTTATTCGGTCAGAGCCTCCGGATCGGAGGTGCTAATAAGCTTGTGAGCAGAGCTTCCGTAACGGAAAACGTTAACGGCGTTTATAGTTTGGTATTAGACCCTCAACAATTGGGGTTGTATTACAAGACGACCATGCGTTACTGGTCGTCTTGTAATACCGTTAACCGTGATTTGGTTAACGCAACTTTTGAAATTGCGGAAGCGGAATATTCTGATAGTAACTTTAACTCACTACGGTGTCGTCTCTCAAACGGGGACGAACCTACTCTGCTTTTTGGGACACTTAGATGCAACAGCACGTTATCGTATCTTCGATTGGGGATCGATGGGAACCTTAGATTGTTCAGTTATCGGCAAAATGCGAATGCGGCCGCGTGGAGCTTGGTGTTCACTTTTTTCCGTAAAGATGCAATCAGGGTGCAGGCGGAAATCGAAGACGAGTGTCAATTGCCTGATCGGTGTGGGAAGTTTGGGGTTTGTGAGGATAGTCAATGCGTTGGGTGCCCGACACCGAATGGGGTTTTCGCGTGGAGTAAAGATTGTGTTGCAAAGTTGCCGGGTTGTGACGCGAGTGGTTTTCGTTATTACGAGCTCAAAGGGGTGGACCATTTCACGGTGAAATATAGTGCAGGGACGGGTCCGGTGAACCGGAAGGACTGCGAGAGTAAATGCACGAAGGATTGCAAGTGTTTGGGGTATTTTTATCATACGGATAGATCGAGATGTTGGGTTGCTCGCGAGCTGAAAACTTTGACTAGAGTTGGGAACTCGACTCATGTGGCGTACATCAAAACGCCCATCCGTTAA | 1305 | 49.27 | MAATTSLFLIFFSFLLFISQATVPPSDTFRYVNSGPYGDSDEVSTEYDPTYRPLPPFTSPFQLCFYNTTPNAYTLSLRMGTRRSRSLMRWVWEANRGKPVRENATFSFSTDGNLVLADSDGRIVWQTNTANKGVVGFQILPTGNMVLHDANGNFIWQSFDSPTDTLLFGQSLRIGGANKLVSRASVTENVNGVYSLVLDPQQLGLYYKTTMRYWSSCNTVNRDLVNATFEIAEAEYSDSNFNSLRCRLSNGDEPTLLFGTLRCNSTLSYLRLGIDGNLRLFSYRQNANAAAWSLVFTFFRKDAIRVQAEIEDECQLPDRCGKFGVCEDSQCVGCPTPNGVFAWSKDCVAKLPGCDASGFRYYELKGVDHFTVKYSAGTGPVNRKDCESKCTKDCKCLGYFYHTDRSRCWVARELKTLTRVGNSTHVAYIKTPIR | 434 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00378 | 434 | CDD | PAN-AP-plant | 355 | 432 | - | - | |
| Sain12g00378 | 434 | PIRSF | SLG | 1 | 434 | IPR035446 | - | |
| Sain12g00378 | 434 | Gene3D | - | 57 | 160 | IPR036426 | - | |
| Sain12g00378 | 434 | SMART | blect-4 | 45 | 162 | IPR001480 | - | |
| Sain12g00378 | 434 | ProSiteProfiles | PAN-Apple domain profile. | 354 | 433 | IPR003609 | - | |
| Sain12g00378 | 434 | CDD | B-lectin | 45 | 162 | IPR001480 | - | |
| Sain12g00378 | 434 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 70 | 215 | IPR036426 | - | |
| Sain12g00378 | 434 | ProSiteProfiles | Bulb-type lectin domain profile. | 42 | 160 | IPR001480 | - | |
| Sain12g00378 | 434 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 58 | 431 | IPR051343 | - | |
| Sain12g00378 | 434 | Pfam | D-mannose binding lectin | 91 | 175 | IPR001480 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00378 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:7267059 | Sain12g00378 | Sain-Chr12:7322835 | dispersed | |
| Sain | Sain-Chr12:7281515 | Sain12g00378 | Sain-Chr12:7322835 | dispersed | |
| Sain | Sain-Chr12:7322835 | Sain12g00380 | Sain-Chr12:7344765 | dispersed | |
| Sain | Sain-Chr12:7322835 | Sain12g00379 | Sain-Chr12:7335647 | tandem |