Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00390 | ATGGATTCACTTAATCAATCAGCTCTTACCCCAAATAAGACCAGATTGGCTCGTACTATGACCAAAGTTTTGCATTTTCGAGCAGCAACGGAGGATAAAAGTCGAAAAACTAAGGTAGGTGAAAAGGTCAAGAATGATGACGATCCAAGGAAGTTATTTAGTGACGAAAATGACGAGTTTCGAAACAGAGCTGCGATGGATGCATTTATTGCCAAAGTTTTTGCGACTATCTCATCGGTGAAAGCTGCGTATGCCCAGTTGCAGTATGCTCAATCTCCTTACGACGCTGAAGGAATTCAGTCGGCTGATCAGATCATGGTCTCTGAACTCAAGAGCTTATCGGAGTTCAAACAGTCGTTCTTGAAGAACCATCTTGACGATAACTCCCCTGAAACAACTCACTTGTTGGCTGAAATTCGAGAACAGAAAAATCTCTTACAAATGTACGAAATCACCGGAAAAAAGCTGGACAGTCAGAGCAAGCTTAAAGACTCCGAGATCATATTCTTGAAAGAGAAATTAGACGAAGCCAATAGAGAAAATAAGTCGATCGAGAAAAGATTAAACGCAAGCGGGCCTTTATCACCTCACGAGAAGCTTCATTTTCCATCGTTTGACGATTTCATATCATCTCTTCGGCAAACCACGAAATCCGTTAGAAGTTTCGTGAAGCTCATGGTCTGTGAAATGGAATCAGCCAATTGGGATTTGGATTCAGCTGCGGGTTCGATCCAACCGGATGTTGTTTACTCAGACCCCACCCATAAATGCTACGCGTTCGAGTCGTTTATTAGTCGAGTGATGTTCGATGGGTTCAATCACTCGAGTTTTTCCATAATCGACGATTCCCAGTCTCCGGTCAACGATAAACGGTTTTTCATCGACAATTTAACGGAACTGAAATCCTTGAAAGCAAAAGAGTACATCAAATTGAAACCAAAATCCATGTTTACGAAATTTTGCTGGTTTAAGTACCTGAGACTTGTTCATCCCGTAATGGAATTCTCTCTTTTCGGGAATTTGAACCAAAGAAACCTGGTGGCTGCCGGAAAATGCCCGAAAACGGCTTTCTTTTCGGCGTTTGCTGATGTGGCGAAGCGGGTTTGGCTCCTCCATTGTTTGGCATTCGCGTTTGAATGGAACGAGGCGGCCGCCGCCGCCACGTTTCAGGTGAGAAAAGGCAGCCGGTTCACGGAGGTGTTCATGGAAAGTGTAAACGAAGAACCGCCGAAAGCGTCGCCGGAGGTGGCGTTCACGGTGGTGCCGGGGTTCAAGGTGGGTAAAACCGTTATACAGTGTCAAGTGTATTTGAGTTGA | 1317 | 44.57 | MDSLNQSALTPNKTRLARTMTKVLHFRAATEDKSRKTKVGEKVKNDDDPRKLFSDENDEFRNRAAMDAFIAKVFATISSVKAAYAQLQYAQSPYDAEGIQSADQIMVSELKSLSEFKQSFLKNHLDDNSPETTHLLAEIREQKNLLQMYEITGKKLDSQSKLKDSEIIFLKEKLDEANRENKSIEKRLNASGPLSPHEKLHFPSFDDFISSLRQTTKSVRSFVKLMVCEMESANWDLDSAAGSIQPDVVYSDPTHKCYAFESFISRVMFDGFNHSSFSIIDDSQSPVNDKRFFIDNLTELKSLKAKEYIKLKPKSMFTKFCWFKYLRLVHPVMEFSLFGNLNQRNLVAAGKCPKTAFFSAFADVAKRVWLLHCLAFAFEWNEAAAAATFQVRKGSRFTEVFMESVNEEPPKASPEVAFTVVPGFKVGKTVIQCQVYLS | 438 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00390 | 438 | Coils | Coil | 167 | 187 | - | - | |
| Sain12g00390 | 438 | Pfam | Plant protein of unknown function (DUF641) | 62 | 187 | IPR006943 | - | |
| Sain12g00390 | 438 | PANTHER | PROTEIN GRAVITROPIC IN THE LIGHT 1 | 17 | 438 | IPR040225 | GO:0009639(InterPro)|GO:0009959(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00390 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 138723 | Sain12g00390 | Sain13g02386 | |
| 138724 | Sain12g00390 | Sain3g00358 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:7608887 | Sain9g02965 | Sain-Chr9:178289790 | dispersed | |
| Sain | Sain-Chr3:222417135 | Sain12g00390 | Sain-Chr12:7608887 | transposed | |
| Sain | Sain-Chr1:93610624 | Sain12g00390 | Sain-Chr12:7608887 | wgd | |
| Sain | Sain-Chr12:7608887 | Sain13g02386 | Sain-Chr13:132787923 | wgd | |
| Sain | Sain-Chr12:7608887 | Sain3g00358 | Sain-Chr3:8462415 | wgd |