Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00391 | ATGACAGAAATCAGGGTTTCACCTCTTTATCTGATTCTCTCCACCTTCGTCTCCATTTATCTGTTTTACTTTCAAGCTCAAGCCGCCCCTGCTGCTACGGTGATTAAGCAATTATCTTCCATTCTTGAGTGGACAGCTAGGTCTTCATCTAAATCACCATCATCAGATGGGAATATTCTTCAATTTGAGGATGGATATTTGGTAGAAACCGTTGTGGAAGGGAATCAATTAGGGGTTGTGCCTTATTCAATTCGGGTCTCGCAGGATGGTGAATTATTTGCTGTTGATGCAGTCAATAGTAACATCGTTCGAATTACTCCTCCACTGTCTCAATATAGTAGGGCAAGATTGATTGCCGGGTCCTTTCAGGGTTACACTGGACATGTAGATGGAAAACCAAATGATGCTCGTTTTGATCGTCCTAAAGGGGTTACTATGGATGATAAAGGGAATGTTTATGTTGCTGATACCTCAAATCTTGCCATTAGAAAGATTGGTGAAGCAGGTGTGACGACAATTGCTGGAGGAAAATCAAACGTAGCAGGGTACAGGGACGGGCCAAGTGAGGATGCACAGTTTTCAACTGACTTTGATGTAATTTATGTGAGGCCAACTTGTTCATTGCTAGTTATTGACCGAGGAAATGCTGCTCTTCGACAAATTTCTCTGAATCAAGAGGATTGTGATTTCCACTACAGCTCCGTTTCTTCCACAGATCTCGTTTTGATAGTTGGTGCTATCTTGATAGGATATGTTGTATCCATGCTTCAACAAGGTTATGGTCCCTCATATTTCTCAAAAGTGCATAAGGTAGATAATGATGCGAAAGGATCAAGCAAGGAAACACCCACTAAAACCCAAACTCAAACTGTGGAAACCATTAGAGAGGAACAAGAAGCAGGATGGCCATCGTTTGGGCAGCTCATTCTGGATCTATTCAAGCTCGCTCTCGAAGGCTTTGGTAACATCTTTGTTTCTTTCAACCCCTTAAACACTCCTAAAAAAGGCCTCACCCCATTAAAAGATTCTCTCATAATGCCCGAAGACGAGCCTGCTAATCCGCCCCCATTAGTTCAAAAACACAGAACTCCAACCCCCCTTTCAGAAACCCGCCATGCCCACAACCCAAACGAAAAATACCCAGAAACAAAGCCCACTAAGCTCAGATCATCTAGCTTAAAAGATCCAAGCAAGCACAGAGTCTCGAAGAGAGAAGAATATGCCGAGTTTTATGGGGGGGCTAGTGGCGAAGTTCCTCATGTTCGGTCCAAGAGTCAGAAGGAAAGAACAAAGCATCGGCCAAGAGAAAAACGAGCAGAGGTTCCGTTCCAGGGCGAGCAAAAACCGGTTGACCTAAAACCGGTCAACTACGATGATCCTAAGTTTAGCTATATGAGGAACAAGTATGGAGACTCTTATCGTTACAATTAA | 1431 | 43.33 | MTEIRVSPLYLILSTFVSIYLFYFQAQAAPAATVIKQLSSILEWTARSSSKSPSSDGNILQFEDGYLVETVVEGNQLGVVPYSIRVSQDGELFAVDAVNSNIVRITPPLSQYSRARLIAGSFQGYTGHVDGKPNDARFDRPKGVTMDDKGNVYVADTSNLAIRKIGEAGVTTIAGGKSNVAGYRDGPSEDAQFSTDFDVIYVRPTCSLLVIDRGNAALRQISLNQEDCDFHYSSVSSTDLVLIVGAILIGYVVSMLQQGYGPSYFSKVHKVDNDAKGSSKETPTKTQTQTVETIREEQEAGWPSFGQLILDLFKLALEGFGNIFVSFNPLNTPKKGLTPLKDSLIMPEDEPANPPPLVQKHRTPTPLSETRHAHNPNEKYPETKPTKLRSSSLKDPSKHRVSKREEYAEFYGGASGEVPHVRSKSQKERTKHRPREKRAEVPFQGEQKPVDLKPVNYDDPKFSYMRNKYGDSYRYN | 476 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00391 | 476 | PANTHER | - | 21 | 474 | - | - | |
| Sain12g00391 | 476 | MobiDBLite | consensus disorder prediction | 339 | 476 | - | - | |
| Sain12g00391 | 476 | SUPERFAMILY | NHL repeat | 75 | 218 | - | - | |
| Sain12g00391 | 476 | Gene3D | - | 15 | 223 | IPR011042 | - | |
| Sain12g00391 | 476 | Pfam | NHL repeat | 138 | 164 | IPR001258 | GO:0005515(InterPro) | |
| Sain12g00391 | 476 | MobiDBLite | consensus disorder prediction | 365 | 407 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00391 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:7634914 | Sain8g02226 | Sain-Chr8:144659306 | dispersed | |
| Sain | Sain-Chr12:7634914 | Sain4g00169 | Sain-Chr4:4605023 | transposed |