Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00392 | ATGGGTTGTTTTGGATCGTCGCTAATTAAACAAGACAGAACAACGAAACAAATAAGGAAGCCAAAGCCCTGGAAATTCCCACGGCCGGTTACATGGAGTCAGCTGGTGCAGATGCGTGACGAGTTTTGGGATACAGCTCCACACCATGGTGGCAAAAAAGAAATCTGGGATGCGATACACGCAGCAGCTGAGGCTGATATAGAGCTTGCTCAAGCAATTGTGGACAGTGCAGGGGTCATTGTTCATAAACCTGATATGACAGTTTGTCATGATGAAGGAGGTACCAAATACGAAATACCAAGGTATGTCTTGAGCGAGCCAACAAACTTGATACAACTAAGCTGA | 345 | 45.51 | MGCFGSSLIKQDRTTKQIRKPKPWKFPRPVTWSQLVQMRDEFWDTAPHHGGKKEIWDAIHAAAEADIELAQAIVDSAGVIVHKPDMTVCHDEGGTKYEIPRYVLSEPTNLIQLS | 114 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00392 | 114 | PANTHER | UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED | 10 | 111 | IPR039869 | - | |
| Sain12g00392 | 114 | Gene3D | - | 31 | 104 | IPR038169 | - | |
| Sain12g00392 | 114 | Pfam | Ubiquitin-binding domain | 15 | 112 | IPR032752 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00392 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:7638569 | Sain9g02968 | Sain-Chr9:178417637 | dispersed | |
| Sain | Sain-Chr1:93553356 | Sain12g00392 | Sain-Chr12:7638569 | wgd |