Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00415 | ATGAGATGTAACGCATGCTGGCGGGAGCTGGAAGGGAGAGCTATCTCTACCACATGTGGACATATCTTATGCAATGAAGATGCCAGTAAGATACTAAGTAGCGACGCAGCTTGCCCTATTTGTGATCAAGTACTTTCTAAAAGTCTCATGAAACCTGTGGATATCAACCCAAATGAAGAATGGATAAATATGGCTATGGCTGGCATATCTCCACAGATACTAATGAAGAGCGCATATAGAAGTGTGTCATTCTACATTGGACAAAAGGAACTAGAAATGCAATTCAAGATGAACAAGATAGTAGCTCAATGCCGGCAAAAATGTGAAGCGATGCAAGAGAAGTTCACAGAAAAAATGGAGCAGGTGCATACTGCATATCAGAAAATGGCCAAAAGGTGTCAAATGATGGAACAAGAAATTGAAAACTTGTCCAAAGATAAACAGGAGCTCCAAGAAAAGTTTTCTGAGAAATCCAGGCAAAAGAGAAAACTGGACGAGATGTATGATCAATTGAGAAATGAGTATGAATCGGTCAAACGGTCAGCCATTCAACCAGCAAACAATTTCTTCTCAAGGGCTGAACCTGATCTGTTTGCCAGTCCTGCTAATATGATGGATAATAGAGATTCCATGAGGAAAGATTGGTCGGTTCTCACCCCTGAAACTCCAGGACCTCGCGAAGATATATGGCCACCGACAACAAGGCAGAACAGTGGTAACTCTGGGCAATTCGACATTTCTAGTAACTCACCCGTAAAACATTCAGCAATGCCAGTTGAAAACAGAAGAGCTGTTGGTCGCCCCATGTTCGGAGGTGGAGGTGGAGGTGGTGGTGGTGGTGGTGCAGCCAACAATCCCTCTATGACTTTGAGAAATCTCATATTATCACCAATGAAACGGCCTCAGCTCTCTCGTAGCCGACCTCAACTCTTCACGTAA | 939 | 43.45 | MRCNACWRELEGRAISTTCGHILCNEDASKILSSDAACPICDQVLSKSLMKPVDINPNEEWINMAMAGISPQILMKSAYRSVSFYIGQKELEMQFKMNKIVAQCRQKCEAMQEKFTEKMEQVHTAYQKMAKRCQMMEQEIENLSKDKQELQEKFSEKSRQKRKLDEMYDQLRNEYESVKRSAIQPANNFFSRAEPDLFASPANMMDNRDSMRKDWSVLTPETPGPREDIWPPTTRQNSGNSGQFDISSNSPVKHSAMPVENRRAVGRPMFGGGGGGGGGGGAANNPSMTLRNLILSPMKRPQLSRSRPQLFT | 312 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00415 | 312 | ProSiteProfiles | Zinc finger RING-type profile. | 3 | 42 | IPR001841 | - | |
| Sain12g00415 | 312 | MobiDBLite | consensus disorder prediction | 231 | 254 | - | - | |
| Sain12g00415 | 312 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOG | 1 | 312 | - | GO:0051026(PANTHER) | |
| Sain12g00415 | 312 | Coils | Coil | 126 | 181 | - | - | |
| Sain12g00415 | 312 | MobiDBLite | consensus disorder prediction | 221 | 254 | - | - | |
| Sain12g00415 | 312 | Pfam | zinc-RING finger domain | 2 | 43 | IPR001841 | - | |
| Sain12g00415 | 312 | FunFam | E3 ubiquitin-protein ligase CCNB1IP1 homolog | 1 | 53 | - | - | |
| Sain12g00415 | 312 | SUPERFAMILY | RING-U-box | 2 | 50 | - | - | |
| Sain12g00415 | 312 | Gene3D | Zinc-RING finger domain, C3HC4 (zinc finger) | 1 | 53 | IPR013083 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00415 | K10639 | E3 ubiquitin-protein ligase CCNP1IP1 [EC:2.3.2.27] |