AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00442 | ATGGTAGCTCTGTCAAAACCTCCAATTGAACAGTTCTTTGTGAAACCCTCAAAACCAAACACTAACCCCTTAATCTTTCCATCAATTCCTCTCATTGACCTCTCAAAACCTGAATCAAAACACCAACTTGTTAAGGCTTGTCAAGATTTTGGATTCTTTAAGGTGGTTAATCATGGAGTTCCTAAAAAGTTCATCAATAAGCTTGAATCAGAAGCTGTCAAATTCTTCTCTTCTCCTCTTTCTACCAAAGAAAAAGCCGGACCACCCGACCCGTTTGGTTATGCAAACAAAAGCATTGGTAAAAATGGAGATGTGGGTTGGGTTGAATATCTTCTTCTCAACGCGAAACTCGAATCGGATTACCAGAGATATTTATCTGTGTTTGAAGAAAACCCAGAAATATTCCAGGGAGTTGTGAATGATTATGTGACAGCAGTGAAGAAGATGGCATGTGAGATTCTTGAGTTATTGGCAGATGAAATGAAACTGCAGCCAAGAAATGTGTTCAGTAAACTGTTGATGGATGAAGAAAGTGACTCTTTTTTCAGAGTAAATCACTACCCACCATGCCCAGAGTTTCAAGAAAACGAAAGAAATGGAAGGAAATTGGTGGGTTTTGGAGAACACACAGACCCACAAATTATATCTGTTTTAAGATCAAATAACACATCTGGGCTTGAAATTTCATTAAGAGATGGAAGTTGGATGTCTGTTCCTGCTGATTCTGACTCTTTCTTCATCAATGTTGGCGACTCTTTACAGGTTATGACAAATGGAAGATTCAAGAGTGTGAAGCATAGGGTGGTGGCAAATGGTAAAAAGAGTAGGGTGTCAATGATTTACTTTGGAGGACCACCATTGAGTGAGAAGATAGCTCCATTAACATCACTTATGCAAGAAGAGGAAGACAGTTTATACAAGGAGTTTACTTGGTTCGAGTACAAGAAATCTGCATTAAAGTCAAGATTGTCCGACAACAGATTGGGCATGTTCGAGAAAATCGTTGCATCATAG | 1014 | 38.95 | MVALSKPPIEQFFVKPSKPNTNPLIFPSIPLIDLSKPESKHQLVKACQDFGFFKVVNHGVPKKFINKLESEAVKFFSSPLSTKEKAGPPDPFGYANKSIGKNGDVGWVEYLLLNAKLESDYQRYLSVFEENPEIFQGVVNDYVTAVKKMACEILELLADEMKLQPRNVFSKLLMDEESDSFFRVNHYPPCPEFQENERNGRKLVGFGEHTDPQIISVLRSNNTSGLEISLRDGSWMSVPADSDSFFINVGDSLQVMTNGRFKSVKHRVVANGKKSRVSMIYFGGPPLSEKIAPLTSLMQEEEDSLYKEFTWFEYKKSALKSRLSDNRLGMFEKIVAS | 337 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00442 | 337 | ProSiteProfiles | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 177 | 285 | IPR005123 | - | |
| Sain12g00442 | 337 | FunFam | Gibberellin 2-beta-dioxygenase 1 | 8 | 324 | - | - | |
| Sain12g00442 | 337 | SUPERFAMILY | Clavaminate synthase-like | 12 | 325 | - | - | |
| Sain12g00442 | 337 | Pfam | 2OG-Fe(II) oxygenase superfamily | 179 | 283 | IPR044861 | - | |
| Sain12g00442 | 337 | Pfam | non-haem dioxygenase in morphine synthesis N-terminal | 29 | 122 | IPR026992 | - | |
| Sain12g00442 | 337 | Gene3D | - | 3 | 326 | IPR027443 | - | |
| Sain12g00442 | 337 | PANTHER | 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED | 27 | 316 | IPR050231 | GO:0009416(PANTHER)|GO:0016706(PANTHER)|GO:0045487(PANTHER)|GO:0052634(PANTHER) | |
| Sain12g00442 | 337 | PRINTS | Isopenicillin N synthase signature | 43 | 60 | - | - | |
| Sain12g00442 | 337 | PRINTS | Isopenicillin N synthase signature | 209 | 230 | - | - | |
| Sain12g00442 | 337 | PRINTS | Isopenicillin N synthase signature | 245 | 271 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00442 | K04125 | gibberellin 2beta-dioxygenase [EC:1.14.11.13] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:9254059 | Sain1g01142 | Sain-Chr1:85092634 | dispersed | |
| Sain | Sain-Chr9:124860327 | Sain12g00442 | Sain-Chr12:9254059 | transposed | |
| Sain | Sain-Chr1:91137569 | Sain12g00442 | Sain-Chr12:9254059 | wgd | |
| Sain | Sain-Chr12:9254059 | Sain13g02335 | Sain-Chr13:131682889 | wgd | |
| Sain | Sain-Chr12:9254059 | Sain3g00384 | Sain-Chr3:9019351 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Sain1g00195 | . | 61 | 356 | GA20OX gene family | AT5G51810 | 32.131 | 1.46e-37 | 136.0 | |
| Sain1g00287 | . | 25 | 371 | GA20OX gene family | AT5G51810 | 62.712 | 4.37e-165 | 465.0 | |
| Sain1g01142 | . | 63 | 360 | GA20OX gene family | AT5G51810 | 26.562 | 1.06e-28 | 112.0 | |
| Sain1g01581 | . | 60 | 327 | GA20OX gene family | AT5G51810 | 33.091 | 6.64e-38 | 137.0 | |
| Sain1g01669 | . | 75 | 372 | GA20OX gene family | AT5G07200 | 29.126 | 2.17e-39 | 140.0 | |
| Sain2g01688 | . | 40 | 353 | GA20OX gene family | AT4G25420 | 36.278 | 9.27e-62 | 200.0 | |
| Sain2g01902 | . | 27 | 339 | GA20OX gene family | AT1G60980 | 32.704 | 7.45e-45 | 156.0 | |
| Sain3g00165 | . | 36 | 364 | GA20OX gene family | AT1G60980 | 33.038 | 5.41e-48 | 164.0 | |
| Sain3g00167 | ACH | 56 | 335 | GA20OX gene family | AT5G07200 | 26.804 | 1.39e-19 | 86.7 | |
| Sain3g00170 | . | 56 | 335 | GA20OX gene family | AT5G07200 | 27.915 | 2.31e-24 | 99.8 | |
| Sain3g00171 | . | 57 | 335 | GA20OX gene family | AT5G07200 | 28.47 | 6.14e-28 | 109.0 | |
| Sain3g00172 | ACH | 57 | 335 | GA20OX gene family | AT5G07200 | 29.225 | 2.43e-25 | 102.0 | |
| Sain3g00173 | . | 57 | 335 | GA20OX gene family | AT5G07200 | 27.208 | 1.10e-17 | 80.9 | |
| Sain3g00174 | ACH | 187 | 335 | GA20OX gene family | AT5G07200 | 37.662 | 2.82e-21 | 87.8 | |
| Sain3g00175 | . | 57 | 335 | GA20OX gene family | AT5G07200 | 29.329 | 1.57e-23 | 97.8 | |
| Sain3g00176 | . | 57 | 335 | GA20OX gene family | AT5G07200 | 28.269 | 3.58e-23 | 96.7 | |
| Sain3g00178 | . | 57 | 335 | GA20OX gene family | AT5G07200 | 28.723 | 7.19e-24 | 98.6 | |
| Sain3g00180 | . | 61 | 370 | GA20OX gene family | AT4G25420 | 27.358 | 2.88e-23 | 97.1 | |
| Sain3g00181 | . | 58 | 336 | GA20OX gene family | AT4G25420 | 24.028 | 7.50e-15 | 72.8 | |
| Sain3g00182 | . | 81 | 336 | GA20OX gene family | AT5G07200 | 24.71 | 3.42e-16 | 76.6 | |
| Sain3g00384 | . | 63 | 346 | GA20OX gene family | AT5G51810 | 31.208 | 1.23e-39 | 142.0 | |
| Sain3g00440 | . | 80 | 351 | GA20OX gene family | AT1G60980 | 28.881 | 4.76e-40 | 142.0 | |
| Sain3g00441 | . | 80 | 351 | GA20OX gene family | AT1G60980 | 28.52 | 1.72e-39 | 140.0 | |
| Sain3g00622 | . | 44 | 352 | GA20OX gene family | AT4G25420 | 33.333 | 2.18e-51 | 173.0 | |
| Sain3g01728 | . | 47 | 368 | GA20OX gene family | AT5G07200 | 29.268 | 7.22e-27 | 107.0 | |
| Sain3g03257 | . | 40 | 368 | GA20OX gene family | AT4G25420 | 33.431 | 3.25e-57 | 189.0 | |
| Sain3g03793 | . | 72 | 351 | GA20OX gene family | AT4G25420 | 30.263 | 3.77e-31 | 119.0 | |
| Sain3g04157 | . | 35 | 352 | GA20OX gene family | AT4G25420 | 28.614 | 1.14e-40 | 144.0 | |
| Sain3g04158 | . | 42 | 358 | GA20OX gene family | AT5G51810 | 29.63 | 5.13e-39 | 140.0 | |
| Sain3g04159 | . | 35 | 352 | GA20OX gene family | AT4G25420 | 29.499 | 3.37e-43 | 151.0 | |
| Sain3g04160 | . | 41 | 366 | GA20OX gene family | AT4G25420 | 33.03 | 7.07e-50 | 169.0 | |
| Sain3g04229 | . | 61 | 349 | GA20OX gene family | AT5G51810 | 30.233 | 6.05e-34 | 126.0 | |
| Sain4g00898 | . | 53 | 332 | GA20OX gene family | AT5G07200 | 36.299 | 1.38e-47 | 163.0 | |
| Sain4g01645 | . | 40 | 356 | GA20OX gene family | AT4G25420 | 32.335 | 6.77e-53 | 177.0 | |
| Sain4g01902 | . | 11 | 375 | GA20OX gene family | AT4G25420 | 67.847 | 0.0 | 514.0 | |
| Sain4g02717 | . | 287 | 335 | GA20OX gene family | AT5G07200 | 48.98 | 6.57e-09 | 48.5 | |
| Sain4g02719 | . | 54 | 357 | GA20OX gene family | AT4G25420 | 27.451 | 8.61e-31 | 117.0 | |
| Sain5g00246 | . | 32 | 356 | GA20OX gene family | AT4G25420 | 31.792 | 7.15e-48 | 163.0 | |
| Sain5g00567 | . | 54 | 357 | GA20OX gene family | AT4G25420 | 23.203 | 4.65e-21 | 90.5 | |
| Sain5g00569 | . | 54 | 361 | GA20OX gene family | AT4G25420 | 24.839 | 1.00e-23 | 98.2 | |
| Sain5g00751 | . | 59 | 146 | GA20OX gene family | AT4G25420 | 31.868 | 4.06e-09 | 50.8 | |
| Sain6g00146 | . | 36 | 357 | GA20OX gene family | AT5G51810 | 29.268 | 9.43e-47 | 161.0 | |
| Sain7g00050 | . | 61 | 125 | GA20OX gene family | AT4G25420 | 38.462 | 3.83e-09 | 51.6 | |
| Sain7g00090 | . | 38 | 150 | GA20OX gene family | AT4G25420 | 34.513 | 3.89e-15 | 69.7 | |
| Sain7g00091 | . | 38 | 343 | GA20OX gene family | AT4G25420 | 32.573 | 5.63e-50 | 169.0 | |
| Sain7g00093 | . | 38 | 152 | GA20OX gene family | AT4G25420 | 34.783 | 5.25e-17 | 75.1 | |
| Sain7g00094 | . | 205 | 334 | GA20OX gene family | AT1G60980 | 41.985 | 3.18e-30 | 112.0 | |
| Sain7g01184 | . | 32 | 379 | GA20OX gene family | AT5G07200 | 46.023 | 1.09e-116 | 342.0 | |
| Sain7g01378 | . | 61 | 355 | GA20OX gene family | AT1G44090 | 30.0 | 1.21e-33 | 125.0 | |
| Sain7g01989 | ACH | 61 | 357 | GA20OX gene family | AT4G25420 | 25.902 | 4.69e-17 | 79.0 | |
| Sain7g01990 | ACH | 56 | 335 | GA20OX gene family | AT5G07200 | 26.855 | 1.78e-23 | 97.4 | |
| Sain7g01991 | ACH | 55 | 335 | GA20OX gene family | AT5G07200 | 27.431 | 3.31e-25 | 102.0 | |
| Sain8g00062 | . | 40 | 359 | GA20OX gene family | AT4G25420 | 33.025 | 2.17e-58 | 191.0 | |
| Sain8g00607 | . | 24 | 375 | GA20OX gene family | AT4G25420 | 70.339 | 0.0 | 522.0 | |
| Sain8g00782 | . | 69 | 358 | GA20OX gene family | AT1G60980 | 32.441 | 6.16e-32 | 123.0 | |
| Sain8g01023 | . | 40 | 356 | GA20OX gene family | AT4G25420 | 34.268 | 3.22e-59 | 193.0 | |
| Sain8g01024 | . | 40 | 356 | GA20OX gene family | AT4G25420 | 34.268 | 3.22e-59 | 193.0 | |
| Sain8g02593 | . | 56 | 330 | GA20OX gene family | AT1G60980 | 28.477 | 8.42e-27 | 107.0 | |
| Sain8g03005 | . | 40 | 360 | GA20OX gene family | AT1G60980 | 34.347 | 5.60e-49 | 167.0 | |
| Sain9g02067 | . | 203 | 294 | GA20OX gene family | AT1G44090 | 33.333 | 1.45e-13 | 63.5 | |
| Sain9g02542 | . | 55 | 341 | GA20OX gene family | AT4G25420 | 32.99 | 8.17e-45 | 155.0 | |
| Sain9g03190 | . | 34 | 351 | GA20OX gene family | AT1G60980 | 31.804 | 2.19e-43 | 152.0 | |
| Sain9g03279 | . | 7 | 373 | GA20OX gene family | AT4G25420 | 61.725 | 4.19e-167 | 470.0 | |
| Sain10g00487 | . | 58 | 367 | GA20OX gene family | AT5G51810 | 35.202 | 1.54e-46 | 159.0 | |
| Sain10g00942 | . | 40 | 368 | GA20OX gene family | AT4G25420 | 31.751 | 4.53e-52 | 175.0 | |
| Sain10g02746 | . | 61 | 327 | GA20OX gene family | AT5G51810 | 30.686 | 5.66e-27 | 106.0 | |
| Sain11g00157 | . | 86 | 356 | GA20OX gene family | AT4G25420 | 33.571 | 1.37e-36 | 133.0 | |
| Sain11g00530 | . | 40 | 356 | GA20OX gene family | AT4G25420 | 34.043 | 5.36e-56 | 186.0 | |
| Sain11g02417 | . | 55 | 357 | GA20OX gene family | AT4G25420 | 27.036 | 4.56e-26 | 104.0 | |
| Sain11g03654 | . | 42 | 117 | GA20OX gene family | AT5G51810 | 32.099 | 2.32e-07 | 47.4 | |
| Sain12g00442 | . | 62 | 373 | GA20OX gene family | AT5G51810 | 30.65 | 3.84e-42 | 148.0 | |
| Sain12g00939 | . | 34 | 330 | GA20OX gene family | AT1G60980 | 31.889 | 1.78e-40 | 145.0 | |
| Sain13g02335 | . | 53 | 346 | GA20OX gene family | AT5G51810 | 30.82 | 5.40e-39 | 140.0 | |
| Sain13g02474 | . | 35 | 330 | GA20OX gene family | AT5G07200 | 33.981 | 4.11e-49 | 167.0 | |
| Sain14g00022 | . | 60 | 349 | GA20OX gene family | AT5G51810 | 33.67 | 6.70e-41 | 145.0 | |
| Sain14g00147 | . | 21 | 330 | GA20OX gene family | AT4G25420 | 31.23 | 2.06e-40 | 144.0 | |
| Sain14g01351 | . | 59 | 347 | GA20OX gene family | AT4G25420 | 28.276 | 1.54e-38 | 139.0 | |
| Sain14g01989 | . | 37 | 334 | GA20OX gene family | AT5G07200 | 35.179 | 7.73e-49 | 167.0 | |
| Sain14g02363 | . | 194 | 366 | GA20OX gene family | AT4G25420 | 38.506 | 1.59e-33 | 120.0 | |
| Sain14g02364 | . | 194 | 366 | GA20OX gene family | AT4G25420 | 38.506 | 1.59e-33 | 120.0 | |
| Sain16g00198 | . | 39 | 352 | GA20OX gene family | AT4G25420 | 29.467 | 3.95e-42 | 148.0 | |
| Sain16g00199 | . | 42 | 351 | GA20OX gene family | AT5G51810 | 31.366 | 1.04e-41 | 147.0 | |
| Sain16g00201 | . | 40 | 343 | GA20OX gene family | AT4G25420 | 30.293 | 1.04e-42 | 150.0 | |
| Sain16g00204 | . | 39 | 369 | GA20OX gene family | AT4G25420 | 34.125 | 1.18e-58 | 192.0 | |
| Sain16g00206 | . | 39 | 352 | GA20OX gene family | AT4G25420 | 29.467 | 3.95e-42 | 148.0 | |
| Sain16g01385 | . | 57 | 357 | GA20OX gene family | AT1G60980 | 32.353 | 1.80e-44 | 155.0 | |
| Sain10000438.1g00001 | . | 62 | 363 | GA20OX gene family | AT5G51810 | 29.721 | 2.42e-25 | 102.0 |