AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00443 ATGGCAGAAAGAAAGGTGTTGAATAAATATTATCCGCCGGATTTTGATCCGGCAAAAATTCCAAGGAGGCGTATGCCCAAGAATCAACAAATAAAAGTTAGAATGATGCTTCCGATGAGTATTCGCTGCAGCACATGTGGAAACTACATTTACAAGGGTACCAAGTTCAATTCACGTAAGGAAGACGTTATTGGAGAGACGTATCTTGGTATTCAAATATTCAGGTTCTATTTTAAGTGCACCAAGTGCTCTGCTGAGATTACCATGAAGACAGACCCACAAAACTCTGATTATGTTGTTGAGTCTGGAGCTGCCAGGAATTTTGAGCCTTGGCGTGCAGAGGATGAGGTGGTAGATGAGGAGCAGAAAAAAAGAGATGCTGAAGAAATGGGAGATGCAATGAAGTCCCTGGAGAATAGAACTCTTGATTCTAAAAGAGAGATGGACATCCTTTCTGCTCTCGATGAAATGAAGTCCATGAAGTCGAGGCATGCGACAGTTAGTGTCGATGCGATGCTTGAAGCATTGCAGCGCTCAGCTCCGATAGAGGAGGACAAGCTTGAAGAACAGGATGAAGCCCTTATAAAATCCATCTTCCAAGGATCAAAAGAGTATATCCGTAGAATTGACGATGATGAGCTTGAAGATGACGATGAGTTAACAATTCCAGGCGGTGAAACTTCACAAGTTAACGCTAAGAAGAGGAAGGCTACTGAAGATCGGCCAACGGATTATTTGACAAAAACCAGCACCATTAGCGTTGACAAGCTGAGGAAGAGAGAAGATGAAAAGGGTGGTGGAAGTATCGTCCTAAAGTCTTCGACAGTTAAATTTTCAGTTGTGAAGAAGCCATCGTCGGATGGTGGTAAAACACAAACAACTGAAAAGGAACAAGAGAAGGTTACAGTTACAACTAGTAGCGGACTACAATCTTTATGCCAACAGTATGATAGTACCGACGATGAAGAATAA 972 42.28 MAERKVLNKYYPPDFDPAKIPRRRMPKNQQIKVRMMLPMSIRCSTCGNYIYKGTKFNSRKEDVIGETYLGIQIFRFYFKCTKCSAEITMKTDPQNSDYVVESGAARNFEPWRAEDEVVDEEQKKRDAEEMGDAMKSLENRTLDSKREMDILSALDEMKSMKSRHATVSVDAMLEALQRSAPIEEDKLEEQDEALIKSIFQGSKEYIRRIDDDELEDDDELTIPGGETSQVNAKKRKATEDRPTDYLTKTSTISVDKLRKREDEKGGGSIVLKSSTVKFSVVKKPSSDGGKTQTTEKEQEKVTVTTSSGLQSLCQQYDSTDDEE 323
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00443 323 Pfam Saf4-Yju2 protein 9 314 IPR007590 GO:0000398(InterPro)
Sain12g00443 323 MobiDBLite consensus disorder prediction 298 316 - -
Sain12g00443 323 PANTHER SPLICING FACTOR YJU2 1 287 IPR007590 GO:0000398(InterPro)|GO:0008380(PANTHER)|GO:0071006(PANTHER)
Sain12g00443 323 MobiDBLite consensus disorder prediction 213 244 - -
Sain12g00443 323 Hamap Splicing factor YJU2 [YJU2]. 1 320 IPR043701 GO:0000398(InterPro)
Sain12g00443 323 Coils Coil 120 140 - -
Sain12g00443 323 MobiDBLite consensus disorder prediction 280 323 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00443 K13115 coiled-coil domain-containing protein 130