Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00443 | ATGGCAGAAAGAAAGGTGTTGAATAAATATTATCCGCCGGATTTTGATCCGGCAAAAATTCCAAGGAGGCGTATGCCCAAGAATCAACAAATAAAAGTTAGAATGATGCTTCCGATGAGTATTCGCTGCAGCACATGTGGAAACTACATTTACAAGGGTACCAAGTTCAATTCACGTAAGGAAGACGTTATTGGAGAGACGTATCTTGGTATTCAAATATTCAGGTTCTATTTTAAGTGCACCAAGTGCTCTGCTGAGATTACCATGAAGACAGACCCACAAAACTCTGATTATGTTGTTGAGTCTGGAGCTGCCAGGAATTTTGAGCCTTGGCGTGCAGAGGATGAGGTGGTAGATGAGGAGCAGAAAAAAAGAGATGCTGAAGAAATGGGAGATGCAATGAAGTCCCTGGAGAATAGAACTCTTGATTCTAAAAGAGAGATGGACATCCTTTCTGCTCTCGATGAAATGAAGTCCATGAAGTCGAGGCATGCGACAGTTAGTGTCGATGCGATGCTTGAAGCATTGCAGCGCTCAGCTCCGATAGAGGAGGACAAGCTTGAAGAACAGGATGAAGCCCTTATAAAATCCATCTTCCAAGGATCAAAAGAGTATATCCGTAGAATTGACGATGATGAGCTTGAAGATGACGATGAGTTAACAATTCCAGGCGGTGAAACTTCACAAGTTAACGCTAAGAAGAGGAAGGCTACTGAAGATCGGCCAACGGATTATTTGACAAAAACCAGCACCATTAGCGTTGACAAGCTGAGGAAGAGAGAAGATGAAAAGGGTGGTGGAAGTATCGTCCTAAAGTCTTCGACAGTTAAATTTTCAGTTGTGAAGAAGCCATCGTCGGATGGTGGTAAAACACAAACAACTGAAAAGGAACAAGAGAAGGTTACAGTTACAACTAGTAGCGGACTACAATCTTTATGCCAACAGTATGATAGTACCGACGATGAAGAATAA | 972 | 42.28 | MAERKVLNKYYPPDFDPAKIPRRRMPKNQQIKVRMMLPMSIRCSTCGNYIYKGTKFNSRKEDVIGETYLGIQIFRFYFKCTKCSAEITMKTDPQNSDYVVESGAARNFEPWRAEDEVVDEEQKKRDAEEMGDAMKSLENRTLDSKREMDILSALDEMKSMKSRHATVSVDAMLEALQRSAPIEEDKLEEQDEALIKSIFQGSKEYIRRIDDDELEDDDELTIPGGETSQVNAKKRKATEDRPTDYLTKTSTISVDKLRKREDEKGGGSIVLKSSTVKFSVVKKPSSDGGKTQTTEKEQEKVTVTTSSGLQSLCQQYDSTDDEE | 323 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00443 | 323 | Pfam | Saf4-Yju2 protein | 9 | 314 | IPR007590 | GO:0000398(InterPro) | |
| Sain12g00443 | 323 | MobiDBLite | consensus disorder prediction | 298 | 316 | - | - | |
| Sain12g00443 | 323 | PANTHER | SPLICING FACTOR YJU2 | 1 | 287 | IPR007590 | GO:0000398(InterPro)|GO:0008380(PANTHER)|GO:0071006(PANTHER) | |
| Sain12g00443 | 323 | MobiDBLite | consensus disorder prediction | 213 | 244 | - | - | |
| Sain12g00443 | 323 | Hamap | Splicing factor YJU2 [YJU2]. | 1 | 320 | IPR043701 | GO:0000398(InterPro) | |
| Sain12g00443 | 323 | Coils | Coil | 120 | 140 | - | - | |
| Sain12g00443 | 323 | MobiDBLite | consensus disorder prediction | 280 | 323 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00443 | K13115 | coiled-coil domain-containing protein 130 |