Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sain12g00444	ATGGCTTCTTTTACCACTCCTACCACCTTCACTTCCCTCCCAGCCACTCCGGCAGCCACCACCACCACCACCAAAAGACTCCCAAACTCACCTTTCTTCTCCACTTCCCACCGCCGTTCCAAACAAAGCATCCATCGCAGCTTCAAAGTCTCATGCAACGTGTCCGATAACAACGAAAAGCGACTCGAATCCGAAAAGCTTACACTGCTCGATGGCCACAATCTTGACCGGAGAAACTTGCTTTTAGGGCTCGGCGCCGGTGGCCTTTACACCACGGTGAACTTACCGAAGGCCTTTGCCGATCCGATCACGACGCCTGAAATCTCAACATGCAAAGACTCAACCCAAGGTATCGGTAACCTAAAAGATCACATAAGAACCAATGCATGTTGTCCTCCAACATCTGTAGACCCCATTCAAGATTACGTAATCCCTACCGATGTCGCGCTTCGAACTCGTCCAGCGGCACACAGAGTCACTCAAGAGTATAAAGACAAGTACCAAAGAGCAATGGCAGCCATGAGAGCTCTCCCAGATGAACACCCACACAGCTTCGCTGCACAAGCGAAAATCCATTGCGCTTATTGCAATGGTGGGTACTTTCAGCAAGGTTACCCTGATAAGGAACTTCAGATTCACAACGGCTGGCTCTTCTTTCCTTTCCATCGTTGGTACTTATATTTCTTCGAGAAAATTCTCGGAAAATTGATTAATGATCCTACTTTTGCTTTACCTTACTGGAACTGGGATAATCCTAGTGGAATGAGTATGCCGGGGTTCTTTGAAGGGAAGCTTTTACCCAATGCTGACCCAAGTGTAAGGGTACTAAACGCTGCGTTTGATGCGTTTCGAAACGTGGAACATCTCCCACCAGCCATCGTCAACATGGATTTCCGTAACTCTGCAAGTGGTGCTTTTACTTGTGTACAACAGATTGGTTCTAATCTGACTTTAATGTATAAAGAGATGGTTTCTAACTCACCGAACGCTGACACGTTCTTTGGTGGGGAGTACATAGCTGGGAGTGTTAATGCCAATTCTGCAGGGTCAATAGAGTCAGGTGTTCACACGGCGGTGCATGTATGGACTGGAAACCCTAGAATGCCGAATAATGAAGACATGGGGAACTTTTATTCAGCAGGGTGGGACCCACTGTTCTACACCCACCACGCTAATGTTGACCGTATGTGGAAATTATGGAAGGACATGCAAGGGCCTGATTACCCTGATCACACCGAACCTACTTCCGATGATTGGTTAAACGCGTCATACGTGTTTTACGACGAAAACGAAAAGCTTGTACGTGTTTACAACAAAGACACTGTGAATATGGAGAATCTACGTTACGAATATGAACCATCTCCACTTCCATGGCTTGCGAGTCGACCAGTTGGACGTAACATAAGTTCAAATGTTGTAGCGGACGCCATTGGAACGGTGAAAAAGGTGGAGGAGATGACGTTTCCGGTGAAACTTGATCAGACGGTGAAGGTGTTGGTGAAACGACCGGCTAAAAACAGAAGCAAACAGGATAAGAAGAAAGCTTATGAGTTGTTGTATATTAATGATATTAAGCTTGATGGGCAGAAGTTTGTTAAGTTTGATGTGTTTGTAAATGACCTAGAAGATGGTACTGCAAGTAGTCCTATTGACAGTGAATTTGCGGGGAGTTTTTCGCAGTTGGGACATCTTCATGGGCATAAAATGGTGATGAGGAGTGGGGCAAGCTTCGGGTTGAATGAGCTGTTGGATGATATAAAGGCGGAGAGTGATGAGTATATTTTGGTGACACTGGTGCCTAAGGAAGGGTGTGAGGATGTGACCGTTGGTGAGATCAAGGTTAACTTGGCTCAGTCCACTAATTCAAGATGA	1872	46.1	MASFTTPTTFTSLPATPAATTTTTKRLPNSPFFSTSHRRSKQSIHRSFKVSCNVSDNNEKRLESEKLTLLDGHNLDRRNLLLGLGAGGLYTTVNLPKAFADPITTPEISTCKDSTQGIGNLKDHIRTNACCPPTSVDPIQDYVIPTDVALRTRPAAHRVTQEYKDKYQRAMAAMRALPDEHPHSFAAQAKIHCAYCNGGYFQQGYPDKELQIHNGWLFFPFHRWYLYFFEKILGKLINDPTFALPYWNWDNPSGMSMPGFFEGKLLPNADPSVRVLNAAFDAFRNVEHLPPAIVNMDFRNSASGAFTCVQQIGSNLTLMYKEMVSNSPNADTFFGGEYIAGSVNANSAGSIESGVHTAVHVWTGNPRMPNNEDMGNFYSAGWDPLFYTHHANVDRMWKLWKDMQGPDYPDHTEPTSDDWLNASYVFYDENEKLVRVYNKDTVNMENLRYEYEPSPLPWLASRPVGRNISSNVVADAIGTVKKVEEMTFPVKLDQTVKVLVKRPAKNRSKQDKKKAYELLYINDIKLDGQKFVKFDVFVNDLEDGTASSPIDSEFAGSFSQLGHLHGHKMVMRSGASFGLNELLDDIKAESDEYILVTLVPKEGCEDVTVGEIKVNLAQSTNSR	623

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sain12g00444	623	PRINTS	Tyrosinase copper-binding domain signature	213	230	IPR002227	GO:0016491(InterPro)
	Sain12g00444	623	PRINTS	Tyrosinase copper-binding domain signature	244	249	IPR002227	GO:0016491(InterPro)
	Sain12g00444	623	PRINTS	Tyrosinase copper-binding domain signature	355	366	IPR002227	GO:0016491(InterPro)
	Sain12g00444	623	PRINTS	Tyrosinase copper-binding domain signature	382	400	IPR002227	GO:0016491(InterPro)
	Sain12g00444	623	MobiDBLite	consensus disorder prediction	1	38	-	-
	Sain12g00444	623	Pfam	Polyphenol oxidase middle domain	415	463	IPR022739	GO:0004097(InterPro)
	Sain12g00444	623	Gene3D	-	101	463	IPR008922	-
	Sain12g00444	623	Pfam	Protein of unknown function (DUF-B2219)	488	615	IPR022740	GO:0004097(InterPro)
	Sain12g00444	623	PANTHER	TYROSINASE FAMILY MEMBER	75	568	IPR050316	-
	Sain12g00444	623	Pfam	Common central domain of tyrosinase	183	402	IPR002227	GO:0016491(InterPro)
	Sain12g00444	623	SUPERFAMILY	Di-copper centre-containing domain	121	458	IPR008922	-
	Sain12g00444	623	ProSitePatterns	Tyrosinase and hemocyanins CuB-binding region signature.	383	394	IPR002227	GO:0016491(InterPro)
	Sain12g00444	623	ProSitePatterns	Tyrosinase CuA-binding region signature.	213	230	IPR002227	GO:0016491(InterPro)
	Sain12g00444	623	PIRSF	PPO-plant	1	618	IPR016213	GO:0004097(InterPro)\|GO:0046148(InterPro)
	Sain12g00444	623	MobiDBLite	consensus disorder prediction	1	40	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sain12g00444	K00422	polyphenol oxidase [EC:1.10.3.1]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	138734	Sain12g00444	Sain13g02333

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Sain	Sain-Chr12:9443189	Sain12g00452	Sain-Chr12:9715409	dispersed
	Sain	Sain-Chr12:9443189	Sain12g00449	Sain-Chr12:9611558	proximal
	Sain	Sain-Chr12:9443189	Sain13g02332	Sain-Chr13:131253561	wgd
	Sain	Sain-Chr12:9443189	Sain3g00527	Sain-Chr3:13565150	wgd