Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00457 | ATGGCGATCATAGAACTGCAAGTACATATAGATTGTGCCGGCTGTGAGAACAAGATCCGAAAATCTCTTCAAAAACTCAAAGGGGTGGAGAACGTAGAAATAGACATGGGGTTACAGAAGGTGACGGTGACGGGATACGCCGACGAGAAAAAGGTGTTGAAAACGGTGAGAAGAACCGGCCGGCGAGCTGAGATCTGGAATGTACCCTACAATCCCGACATCCGCAGCCATAACTACAACGTTAATCAGTATGCTCAACAACAACAACAGCAGCAGCAGCAGAATGGTAATGGTGGTTCCGGCACCGCTGGCCCCACGGCGACGTTCTACACACGGCAGCCATCTTCGTCTTCATCGTACAACTACTACAAGCATGGTTACGATGACCACCAGAGTTATAACCCGGTCCAGTCCTCCGGTTTAATTGGACACCAGACCGGTGCTGCTTTTAGTGATGAAAATACCAATGCTGCCTGTAACATCATGTAG | 489 | 49.08 | MAIIELQVHIDCAGCENKIRKSLQKLKGVENVEIDMGLQKVTVTGYADEKKVLKTVRRTGRRAEIWNVPYNPDIRSHNYNVNQYAQQQQQQQQQNGNGGSGTAGPTATFYTRQPSSSSSYNYYKHGYDDHQSYNPVQSSGLIGHQTGAAFSDENTNAACNIM | 162 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00457 | 162 | SUPERFAMILY | HMA, heavy metal-associated domain | 4 | 67 | IPR036163 | GO:0046872(InterPro) | |
| Sain12g00457 | 162 | PANTHER | COPPER TRANSPORT PROTEIN ATOX1-RELATED | 3 | 162 | IPR045181 | GO:0046872(InterPro) | |
| Sain12g00457 | 162 | Pfam | Heavy-metal-associated domain | 8 | 61 | IPR006121 | GO:0046872(InterPro) | |
| Sain12g00457 | 162 | CDD | HMA | 5 | 64 | IPR006121 | GO:0046872(InterPro) | |
| Sain12g00457 | 162 | Gene3D | - | 2 | 65 | - | - | |
| Sain12g00457 | 162 | ProSiteProfiles | Heavy-metal-associated domain profile. | 1 | 64 | IPR006121 | GO:0046872(InterPro) | |
| Sain12g00457 | 162 | MobiDBLite | consensus disorder prediction | 84 | 115 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00457 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:9903944 | Sain9g02932 | Sain-Chr9:176786003 | dispersed | |
| Sain | Sain-Chr12:9903944 | Sain9g02104 | Sain-Chr9:128332878 | transposed | |
| Sain | Sain-Chr12:9903944 | Sain4g02737 | Sain-Chr4:126929776 | transposed |