Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sain12g00462	ATGGCAGCTGCTACTTCTTCTTCTACTTCTACTTGGAATAACCCAAGAACCAAATTCAATTTCCCTTCTTCCAAAGAAATCTTTGCTAATTCCACTTCAATCTCTTTCTCTAACAAACCCAATGCTCGAATCATTCGTTCTGCACTTCAAACACCGTCAATTCATCAGCTACCGAAACACTCCGTCGGAAAATCTTCCACCGTTCCCATTGAATTATCATCTTCTCCGGTGATCCAACAAAATTGGAACTTGTTACAAAAAGTTGCAGCAATGGCATTGGACGCCGTTGAGGATCGGTTAATAGCACGAGAAAAGCAACATCCTTTGCCCAAAACGGCGGACCCAAATATTCAGATCGCCGGAAACTTTTCTCCTGTACCGGAGCAACCGGTGCGTCACTGTTTACCAGTCGTCGGTGAAATTCCGGCGAGTATTCAAGGAGTTTACTTAAGAAATGGTGCTAACCCATTGTTTGAGCCAACCTCCGGCCACCATTTGTTCGACGGTGACGGCATGATTTACGCCGTTAAGTTCGATAACGGTTCCGCTAGCTACGCTTGCCGGTTCACTGAGACTCAGAGACTGGTTCAAGAACGAGCTCTCGGTAAACCGGTTTTCCCGAAAGCAATCGGCGAACTCCATGGACATTCCGGTATAGCCAAGCTGGTACTATTTTACGCGCGTGGCTTATGTGGCTTGATTGACCATAGTCAAGGCATCGGCGTGGCTAACGCCGGCTTAGTTTATTTTAACAATCGGCTTTTAGCCATGTCAGAAGATGATTTGCCTTATCACGTGCGTGTCACGCCTTCCGGCGATTTGAAAACAGCCGGCCGTTACAATTTTGACGAGCAATTAAACTCCACGATGATCGCACACCCGAAACTTGACCCGGTTTCCGGCGAGCTTTTTGCATTGAGCTATGACGTCATCCAGAAGCCTTATTTGAAATACTTTTGGTTTTCACCGGACGGGAAGAAATCAAACGACGTCGCAATTGATTTGGGAAAACCGACGATGGTTCATGATTTCGCGATCACGGAGAATTTCGTGGTGGTGCCGGATCACCAGGTGGTTTTCAAGATGTCGGAGATGATCACCGGTGGTTCGCCGGTGGTGTATGATAAAGAGAAAGTGTCGCGTTTCGGTGTGCTTGATAAGTACGCTACTGACGGGTCGGGTATAAAATGGGTCGAAGTTCCGGATTGTTTCTGTTTTCATCTCTGGAACGCGTGGGAAGAACGCGAAACCGACGAGGTTGTTGTGATCGGATCCTGCATGACTCCGGCGGACTCCATTTTTAACGAATGTAACGAAGAACTCAAAAGTGTTTTATCTGAAATCCGACTTAATCTCAAAACCGGAGAATCCACTCGTCGACCGATAATCTCACCGGAAAACGATGTAAATTTGGAAGCCGGAATGGTGAACAAAAACCTCCTCGGCCGGAAAACTAAATACGCTTACCTCGCCATCGCCGAGCCATGGCCAAAGGTCTCCGGTTTCGCGAAAGTCGATCTATCCACCGGCGACACTAAAAAGTTTTTTTACGGCGACGAAAAATACGGCGGCGAGCCTCTTTTTCTTCCGAATTCCGACGCGGAAGACGACGGCCACATCTTGGCCTTCGTTCACGACGAGAAAACATGGGAATCGGAGCTCCAGATCGTGAATGCAATGACGATGGAGTTAGTGGCGACGGTGAAGCTGCCGTCGAGAGTTCCGTACGGGTTTCATGGAACGTTTATAAACGCCAAAGATTTGGCAACGCAAGCTTAA	1779	47.78	MAAATSSSTSTWNNPRTKFNFPSSKEIFANSTSISFSNKPNARIIRSALQTPSIHQLPKHSVGKSSTVPIELSSSPVIQQNWNLLQKVAAMALDAVEDRLIAREKQHPLPKTADPNIQIAGNFSPVPEQPVRHCLPVVGEIPASIQGVYLRNGANPLFEPTSGHHLFDGDGMIYAVKFDNGSASYACRFTETQRLVQERALGKPVFPKAIGELHGHSGIAKLVLFYARGLCGLIDHSQGIGVANAGLVYFNNRLLAMSEDDLPYHVRVTPSGDLKTAGRYNFDEQLNSTMIAHPKLDPVSGELFALSYDVIQKPYLKYFWFSPDGKKSNDVAIDLGKPTMVHDFAITENFVVVPDHQVVFKMSEMITGGSPVVYDKEKVSRFGVLDKYATDGSGIKWVEVPDCFCFHLWNAWEERETDEVVVIGSCMTPADSIFNECNEELKSVLSEIRLNLKTGESTRRPIISPENDVNLEAGMVNKNLLGRKTKYAYLAIAEPWPKVSGFAKVDLSTGDTKKFFYGDEKYGGEPLFLPNSDAEDDGHILAFVHDEKTWESELQIVNAMTMELVATVKLPSRVPYGFHGTFINAKDLATQA	592

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sain12g00462	592	PANTHER	BETA-CAROTENE DIOXYGENASE	105	584	IPR004294	GO:0009570(PANTHER)\|GO:0010436(PANTHER)\|GO:0016121(PANTHER)\|GO:0016702(InterPro)
	Sain12g00462	592	Pfam	Retinal pigment epithelial membrane protein	126	583	IPR004294	GO:0016702(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sain12g00462	K09840	9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	138741	Sain12g00462	Sain13g02329
	138742	Sain12g00462	Sain3g00522

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Sain	Sain-Chr12:10171395	Sain1g01162	Sain-Chr1:86304193	dispersed
	Sain	Sain-Chr10:109756586	Sain12g00462	Sain-Chr12:10171395	transposed
	Sain	Sain-Chr10:121356088	Sain12g00462	Sain-Chr12:10171395	transposed
	Sain	Sain-Chr12:10171395	Sain13g02329	Sain-Chr13:131144240	wgd
	Sain	Sain-Chr12:10171395	Sain3g00522	Sain-Chr3:13231577	wgd