Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00475 | ATGGTGGATGTGGATGGTAAAGAGAAGTGTAGTAATGGCGGCGATAAGAAGAGGAACAACAACGACAATAGGTGGAGGTGGCGGAGAGTTGTTGGAGCTGTGATCGCTGTTTTAGCTGCCATATATCTCAATCCTTGGTGTCATTCGCACACAATTTCCTTCCTCCATAAACCCTACCTCTGTTCTGAGGATACATGTAAATATACAGGCATTGTTGAGGACTGCTGTTGTGACTATGAAAGCGTTGACAATGTTAATGGAGCAGTTTTACATATCTTGTTGAAAGAGCTTGTTGCGACTCCTTTCTTCCGATATTTCAAGGTCAAGTTATGGTGTGATTGCCCCTTCTGGCTTGATGATGGTATGTGCCGCCTTCGTGATTGCAGTGTATGTGAGTGTCCAGAACATGAATTCCCTGAAATCTTTAAGAAGCCACTTCTGCATATTCTTCCAAAAGATGACCCTGTATGTCAAGAGGGAAACCCGGTGGCTACCGTTGATCGTACCCTAGATGATAAGTCGTTTAGAGGCTGGGTAGAAATAGATAATCCATGGACTCATGATGATGAAACCGACAATGGTGAAATGACGTATGTAAATCTGCAACTGAACCCCGAACGTCATACGGGTTACACAGGGCCATCGGCAAGAAGAATATGGGATGCTATATACTCGGAAAACTGCCCAAGATATGCATTTGGAGAGGTGTGCCCAGAGAAGAAAGTACTATACAAGTTAATATCTGGTATGCACTCCTCAATTTCAATCCACATAGCTGCTGATTATCTGCTTGATGAGACTACCAATCAGTGGGGTCCAAATGATAAATTGATGCATGACCGTGTACTGAAACATCCTGATCGCGTGCAAAACTTGTACTTCACGTTCCTATTCGTTCTTAGAGCTGTAACAAAAGCAGCTGCTTACTTGGATCAGGCTGAGTATGACTCCGGTAACCATGCAGAGGATCTGAAAGCCCAAGCTTTGATACGAAAACTGGTTCACAATCCCAAATTGCAGGCTGCATGCGCTCTTCCATTTGATGAGGCTAAAATGTGGCAAGGCCAAGGTGGACCCATACTCAGACAACAAACCCAAAATCAATTTCGGAACATAAGTGCACTGATGGACTGTGTAGGGTGCGAGAAGTGTCGTCTTTGGGGAAAACTTCAGGTTCTCGGCCTTGGAACTGCTTTAAAAATTCTCTTCTCTGTGGATGATCAAGGAAACCCAGACCCACACCTGCCGTTACAAAGAAATGAAGTGATTGCTCTAATTAATCTACTAAATCGGCTATCGGAATCTCTTATATATGTTACTAATGGGGTCTTTAGTGCCTTGGGCTAA | 1347 | 43.8 | MVDVDGKEKCSNGGDKKRNNNDNRWRWRRVVGAVIAVLAAIYLNPWCHSHTISFLHKPYLCSEDTCKYTGIVEDCCCDYESVDNVNGAVLHILLKELVATPFFRYFKVKLWCDCPFWLDDGMCRLRDCSVCECPEHEFPEIFKKPLLHILPKDDPVCQEGNPVATVDRTLDDKSFRGWVEIDNPWTHDDETDNGEMTYVNLQLNPERHTGYTGPSARRIWDAIYSENCPRYAFGEVCPEKKVLYKLISGMHSSISIHIAADYLLDETTNQWGPNDKLMHDRVLKHPDRVQNLYFTFLFVLRAVTKAAAYLDQAEYDSGNHAEDLKAQALIRKLVHNPKLQAACALPFDEAKMWQGQGGPILRQQTQNQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVDDQGNPDPHLPLQRNEVIALINLLNRLSESLIYVTNGVFSALG | 448 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00475 | 448 | PANTHER | ERO1-RELATED | 34 | 440 | IPR007266 | GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0015035(InterPro)|GO:0015035(PANTHER)|GO:0016972(InterPro)|GO:0034975(PANTHER)|GO:0034975(InterPro)|GO:0071949(InterPro) | |
| Sain12g00475 | 448 | PIRSF | ERO | 29 | 444 | IPR007266 | GO:0005783(InterPro)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0071949(InterPro) | |
| Sain12g00475 | 448 | Pfam | Endoplasmic Reticulum Oxidoreductin 1 (ERO1) | 91 | 437 | IPR007266 | GO:0005783(InterPro)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0071949(InterPro) | |
| Sain12g00475 | 448 | SUPERFAMILY | ERO1-like | 77 | 440 | IPR037192 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00475 | K10950 | ERO1-like protein alpha [EC:1.8.4.-] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 138747 | Sain12g00475 | Sain13g02323 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:10389811 | Sain4g00723 | Sain-Chr4:19897618 | dispersed | |
| Sain | Sain-Chr12:10389811 | Sain13g02323 | Sain-Chr13:130975013 | wgd |