Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00478 | ATGGCGGAGTACAAGAGAGAAAAGAGTGCTACTACTACTAGCGTTGTGGGTACAGGTGGAACCTCTGAAATAATCAGCGGTGAGGGAAGTTTCGGCGGCATCCGGACGGTGGAGACGTTGCTGAGGCTGCTTCCGGTGGGGCTGTGTGTGGCGGCGCTGGTGGTCATGCTTAAAGATTCAGAAACTAATGAATATGGCTCTCTTTCCTACTCCAACATCACTGCTTTCAGGTTTTTGGTGCATGCTAATGGCATATGTGCTGGTTATTCGTTACTATCGGCTGCTTTCACCGCAATACCTCGCCCTATAACCATGCCTCGAGCTTGGACCTTCTTCCTCCTTGATCAGGTTTTAACATACCTGATACTGGCGGCCGGTGCGGTGGCGACGGAGGTGGCGTTTCTAACATACAAAGGAGACGTGGCGGTGACTTGGAGCGAGGTGTGTGGGACCTACGGCGACTTCTGTAGAAAGGCGACGGCGTCCATCGTCATCACTTTCGTGGTGGTGATCTGCTACGTTTTGCTGTCTCTGATCTCATCGTATAGGCTCTTCAGCAAGTATGATGCACCAGTTGGGTACAAAAATAAGGGAATTGAGATCGTCGACTTTGGGAATTAA | 621 | 50.72 | MAEYKREKSATTTSVVGTGGTSEIISGEGSFGGIRTVETLLRLLPVGLCVAALVVMLKDSETNEYGSLSYSNITAFRFLVHANGICAGYSLLSAAFTAIPRPITMPRAWTFFLLDQVLTYLILAAGAVATEVAFLTYKGDVAVTWSEVCGTYGDFCRKATASIVITFVVVICYVLLSLISSYRLFSKYDAPVGYKNKGIEIVDFGN | 206 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00478 | 206 | Pfam | Casparian strip membrane protein domain | 34 | 172 | IPR006702 | - | |
| Sain12g00478 | 206 | PANTHER | CASP-LIKE PROTEIN 4A4 | 35 | 186 | - | - | |
| Sain12g00478 | 206 | NCBIfam | plant integral membrane protein TIGR01569 | 41 | 182 | IPR006459 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00478 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:10430634 | Sain9g00120 | Sain-Chr9:2831947 | dispersed |