AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00478 ATGGCGGAGTACAAGAGAGAAAAGAGTGCTACTACTACTAGCGTTGTGGGTACAGGTGGAACCTCTGAAATAATCAGCGGTGAGGGAAGTTTCGGCGGCATCCGGACGGTGGAGACGTTGCTGAGGCTGCTTCCGGTGGGGCTGTGTGTGGCGGCGCTGGTGGTCATGCTTAAAGATTCAGAAACTAATGAATATGGCTCTCTTTCCTACTCCAACATCACTGCTTTCAGGTTTTTGGTGCATGCTAATGGCATATGTGCTGGTTATTCGTTACTATCGGCTGCTTTCACCGCAATACCTCGCCCTATAACCATGCCTCGAGCTTGGACCTTCTTCCTCCTTGATCAGGTTTTAACATACCTGATACTGGCGGCCGGTGCGGTGGCGACGGAGGTGGCGTTTCTAACATACAAAGGAGACGTGGCGGTGACTTGGAGCGAGGTGTGTGGGACCTACGGCGACTTCTGTAGAAAGGCGACGGCGTCCATCGTCATCACTTTCGTGGTGGTGATCTGCTACGTTTTGCTGTCTCTGATCTCATCGTATAGGCTCTTCAGCAAGTATGATGCACCAGTTGGGTACAAAAATAAGGGAATTGAGATCGTCGACTTTGGGAATTAA 621 50.72 MAEYKREKSATTTSVVGTGGTSEIISGEGSFGGIRTVETLLRLLPVGLCVAALVVMLKDSETNEYGSLSYSNITAFRFLVHANGICAGYSLLSAAFTAIPRPITMPRAWTFFLLDQVLTYLILAAGAVATEVAFLTYKGDVAVTWSEVCGTYGDFCRKATASIVITFVVVICYVLLSLISSYRLFSKYDAPVGYKNKGIEIVDFGN 206
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00478 206 Pfam Casparian strip membrane protein domain 34 172 IPR006702 -
Sain12g00478 206 PANTHER CASP-LIKE PROTEIN 4A4 35 186 - -
Sain12g00478 206 NCBIfam plant integral membrane protein TIGR01569 41 182 IPR006459 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00478 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr12:10430634 Sain9g00120 Sain-Chr9:2831947 dispersed