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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00497 ATGTTCGACGATAAGAAAACTCGTAAGGCTCTGAAAATCGTTGTTGGTGTCTCCGGTGTGGAATCAGCGGCTTTGATAGGCTCAGATAAAGATCAAATCAAGGTGACTGGGGAAGGAATTGACTCCGTTGAACTCGCAAAGCTGCTAAGGAAAGGTGTGGGATGCACAGAGCTGGTGAGTGTTGGTCCGGTGGAGGAGAAGAAACCCGCTGCCACCACTGCTGCCGCCAGTCAAAAGCCAACTACGGTGGTGCCACTGCAAGTTTATCCTCACTATTATAGCAGCTATGAAGGGTCGTACTACCATGTCTATGAAAGTCCCACAAACGACCATCCCTCTTGCACCATGATGTAA 354 49.15 MFDDKKTRKALKIVVGVSGVESAALIGSDKDQIKVTGEGIDSVELAKLLRKGVGCTELVSVGPVEEKKPAATTAAASQKPTTVVPLQVYPHYYSSYEGSYYHVYESPTNDHPSCTMM 117
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00497 117 Gene3D - 1 67 - -
Sain12g00497 117 PANTHER OS04G0464100 PROTEIN 3 117 IPR044296 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00497 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr12:10957568 Sain12g00497 Sain-Chr12:10992620 dispersed
Sain Sain-Chr12:10992620 Sain12g00507 Sain-Chr12:11402353 dispersed
Sain Sain-Chr12:10978994 Sain12g00497 Sain-Chr12:10992620 tandem