AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00500 ATGGCAAAGCAAAAGATCGTGGTGAAGGTGGCCATGCACAGCGAGAAGAAAGCTCGTAAGGCTCTTCAGATCGTTGTTAGTGTTTGCGGTGTGGAATCAGCAGCCTTCGAAGGTTCAGATAAAGACCAGATAGTGGTGATCGGAGAAGGAATTGACTCGGTGAAACTGACAGCTAAGCTAAGGAAATGTGTAGGACACACAGATCTGGTGAGTGTTGGTCTGGAGAAAGAGAAGGAGAAGGAGGAAGACGACGATGAATCGAAACCCACCATGGAATTTTGTCCGTACCAGTACTCCAATGGTTGCTATGGTGCGCCCTGCTATGTGTCCAGGATGTGA 339 48.38 MAKQKIVVKVAMHSEKKARKALQIVVSVCGVESAAFEGSDKDQIVVIGEGIDSVKLTAKLRKCVGHTDLVSVGLEKEKEKEEDDDESKPTMEFCPYQYSNGCYGAPCYVSRM 112
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00500 112 Gene3D - 1 78 - -
Sain12g00500 112 PANTHER OS04G0464100 PROTEIN 4 91 IPR044296 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00500 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr12:11083630 Sain12g00504 Sain-Chr12:11314553 dispersed
Sain Sain-Chr12:11057193 Sain12g00500 Sain-Chr12:11083630 tandem