AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00515 ATGGAGTCACGGCTGCCCATTGACGACAACTCCAATACGAAATCGGAGGAAGGAACAATTGCGTTCCATAAGAAGCGAGCTCGGCGAGTCAGCTTTGCAGAGAACACATCTGTTCACATATTTGACCGTGATGAAGACTCCGGAACTCCATTGGATCCTAAGCCTCCTACTTCTCCATCCAACGACTTAGCCTCTGCTGAACGCGATAATGAACCGAACCAGTTGTTCTGGAATGTAGAAGAAGATGATAATGATAACAATAACGAAGATGATGATATGGATGAACCGGGTTCAAGGAGTCCGTTTTTGCGGTTGGTTGGGTCTCCATCCTCCGGTGGAAGTACCATTGGTTCTGCTAACTCCAACGACGAAGATAATTTTTTTGGTCCCGTATCGGCAAGTTTCATTAGACGAGATTTACTGGACTCTGCTGGCTCAGATGTAAACCATGATCAGACCATGGATTCAACAGCCTTTTCAATGCATTTTCGTAGCATTGCCAGGTCAGACTCAGAAGCGGAATTGAAAACCTCAACAGGAGTTCACCTTTCCTTTGAGGAGAAGACCCCAACTCAGGATTCTGTTCCCACTAATACAGGAACTTCAATGCTAATGACAGTAGCTAAAAAGCCAAATTATCAACCTTCTGTTTCTACCTCCAAAAAAAGCACTTCTTCTGAGTCAAATGATATGAGTATTGTTGGAGAATATCATCACAAGTATGACTATGGAGAACTATCTCCTACACTGGATGCACTTGTAGCAGAAGATAATAAGGACCTCCATGTAATTTCCCCTTCAAATGGTGCTATCCTAAAATCACCAAGAAACACCGAAACAACCAAGGAAGATGGGGGTAAAGAAGGGAATATTACTCCTGAGATGGTCAATGAAGTTGTTTCTCTTGAGCATAATGGGTCAAAATGTTCTCCTAGTAAGCAGATTGCATTAGGCGTATCATCCTACACATCTGATGCTGAGATTTCGAAATCTTTGTTGGCTACTTCATCTATTTTGGCTACCCCTATTGCTATGACGAAGTCAAGTGTGGACTTCTCTGCTACCAGTCAAGATCGTAATCGAAATAACACAGTTTATTTAGACGATGGTATACGAAAGGAACATAAATCACCTTTTGTAGGATCCGTGAACTCTTTATCCGATAAGCCAAGTCACATGCTTTTACATGGTGTTAGTCCATCTAAATCACCACCGGCCATGACTACTCCTCATAATCATTCAAGTTTTTTTGTAAGAACAGAAATTCCAAAACATGGTGGGAGTGTTGCATCCATACAGAAAAGCATTTCTAAACTCAGAATGCTCGAGGCTTCTCCCTTTTCTGCTGTTTTGAATGCTAAACTTGAAGATTCAGCTAAAAAAAGATCCGTAGTCAGCATATCTAAGATGACTCCTTTGTATACTTTCTTGGAGAAAAACGACAAACCTCTCTTACCCAATTATGTGAATGATAGCATGCAATCATCGTCTGCTTTTCAGAAGAAGAGAGAAAGAGCAACTTTAACTAACATGGATCATGTTGGGTTTGAGACACCAAAAAATGGTGTGCCTGTGACTCATATGCAAAATTTTGTCAACGTTGCATCACCATTGTTGTTACCACCTGAAAGCATATGGACTAAAGATAATAAAAGCGAAGTTGGTTTACCTCAAAATTTCGGTTATTCTCCACAGAAAAAGTTAAAGATTGTGAATGCATCAGAACTCACAAGCAGTCCTTTGAGAGATGCAAAACAATTTATTGAACATAATGAGCCAGTAAAGTTTGGGCCCGCTCATGTTGCGGGGTCAGGGGAAAAGGAAAATGTCACTAATGCAAGGCTTTCTACTGAGGCTGCTGATAGGAACGATGCTTTATACATTGAAAGGATAGAAAAATCTAGCCCGATAATCTCCACTGAAAAAGAAATGGTGGATGGCAGAGAGGTTTTTTTTAACGATGTTCGTTTTAACTCAGGAATGAAAGAGAACTCTACAAACTTATTGAAGGATGTAGAACATGAGAAGTTTCGAAATAACTTTACAGGAAGTGAAATTGCGAGGGGAGAGGTGAAAAGAGCCTCTCTGGCTTTGCATGAAGGGGCAGATAAACACTCTTGTCAGAAGAATTTGCATGCTCAGTTTTGTCAAAGTCCCCCGAGTAAACAGCATGAGGACAACGTTGATTCTCTAATGGAGGAAAACGTACCGTCTCCCAGTCCTCATCGTTTATCCATTGGAGATGTAATCTCTGACCGCCAAACAGAAGCTGAAGCTGGGATGGTTGAGAAAACTGCTAGAATTCACATGAGTCCAAATCCCGGAAAAGGTTATGTAGGCCCTGAACTCTCAAGTGACATCGGGATATCGACAATTAGGCACAATCTTAAACATCCGACTGAGATAAATGCAATTTTCTCTAAAGAAACGAGTGAACTTCTATCTCAATCAGTTGATAAGTTTAGTTTGCATTCGATTGATCGTTTGGCAGGCATTGTGGAGCAGCTTCAGAGGTCAAAAACGTATCAGCTTCTTTCTGAAGAAATGCAGTCTCAGAAAAGTGTAGATGCCAGTAAGTATATCCGGCATAAAAGAGCCTCGGAAATGAAACTGCTTTTGTGCCAATTTGTGCACGAGAAAGCAAAGTTGCAGCTACAACATGTGAAGCGGGAGAGGTTACTGAGAAGGGTAAAATCACTTGCTTCTGGAATATTGGAGTCTGAAGTATATAGGTCGAATATTCCACCACAACGATCTTCAGATGTTCATCGCGAGTCCTCGTCAGTCGATATGAAGGACCTTCAGGAGAGCCAAAATGACAGTGAAAAGGTTACTTCAATGCGACAGACAATAGATCGTATTGATGGAAGAATTGCAACTTTGACCAAATCTTTTCACAATTCGTGTAAAATTAAAGGAGAGCCGAGTCCCACTGACACTATTACATTTGTTAATAATTATCTGATGAAACGAGCATGCTGTCAGATGATACGGAAAGATTTGCAGCTTTGGGCTGTGGACAATCTCGAGAGTAGGAATGGTTGCAACAAAGTTGTTCTCAATTACCTCAACCTAATGACTCAAAGGTTTACAGTCAATGTTGTTCCAGTCCCGAGCATTTCCATTTCACATACATTAAATAACGTAAATATCAGCAAGATTTTCAAAGATATGGATGCTTTCACTGCATTTAGATTCGTCTTCAATACTGAAATAACACAGAAGCATGTTGGTGCTACAAGCTTGGCACAAGAAACTCAAGTGACTGGTTCTTGTTTGGGCAATTTGTTAGATGTGGTGTCCGAGATACAACTTGCTAGAATAGAGCTTAAAAATCTGATTTCTACAAGATTTTGTACACCCTTAGCTGAACAACTTGAACTGGAGCTCTGTTTCTTTGATTCAAAACATTGCAGGAAGGCAACAGTAACTTTAGATACTTCATGTTTGAGAAGGGGTATCTATCCATCAGAGATCATTCCATCTCAGATCGACATTTCAGTCAAAGAGCCACAAAGTTCTGCATCGCTTAAGGATGAGATAGCTGCAGCGTTGCAAGATCTTAAAGTGGGATATTTAAGGATTCAGCAGCTTTGTAGGTGCATTTCCAAGTTAATCAGCTCTCCAATCAGGTAA 3636 40.7 MESRLPIDDNSNTKSEEGTIAFHKKRARRVSFAENTSVHIFDRDEDSGTPLDPKPPTSPSNDLASAERDNEPNQLFWNVEEDDNDNNNEDDDMDEPGSRSPFLRLVGSPSSGGSTIGSANSNDEDNFFGPVSASFIRRDLLDSAGSDVNHDQTMDSTAFSMHFRSIARSDSEAELKTSTGVHLSFEEKTPTQDSVPTNTGTSMLMTVAKKPNYQPSVSTSKKSTSSESNDMSIVGEYHHKYDYGELSPTLDALVAEDNKDLHVISPSNGAILKSPRNTETTKEDGGKEGNITPEMVNEVVSLEHNGSKCSPSKQIALGVSSYTSDAEISKSLLATSSILATPIAMTKSSVDFSATSQDRNRNNTVYLDDGIRKEHKSPFVGSVNSLSDKPSHMLLHGVSPSKSPPAMTTPHNHSSFFVRTEIPKHGGSVASIQKSISKLRMLEASPFSAVLNAKLEDSAKKRSVVSISKMTPLYTFLEKNDKPLLPNYVNDSMQSSSAFQKKRERATLTNMDHVGFETPKNGVPVTHMQNFVNVASPLLLPPESIWTKDNKSEVGLPQNFGYSPQKKLKIVNASELTSSPLRDAKQFIEHNEPVKFGPAHVAGSGEKENVTNARLSTEAADRNDALYIERIEKSSPIISTEKEMVDGREVFFNDVRFNSGMKENSTNLLKDVEHEKFRNNFTGSEIARGEVKRASLALHEGADKHSCQKNLHAQFCQSPPSKQHEDNVDSLMEENVPSPSPHRLSIGDVISDRQTEAEAGMVEKTARIHMSPNPGKGYVGPELSSDIGISTIRHNLKHPTEINAIFSKETSELLSQSVDKFSLHSIDRLAGIVEQLQRSKTYQLLSEEMQSQKSVDASKYIRHKRASEMKLLLCQFVHEKAKLQLQHVKRERLLRRVKSLASGILESEVYRSNIPPQRSSDVHRESSSVDMKDLQESQNDSEKVTSMRQTIDRIDGRIATLTKSFHNSCKIKGEPSPTDTITFVNNYLMKRACCQMIRKDLQLWAVDNLESRNGCNKVVLNYLNLMTQRFTVNVVPVPSISISHTLNNVNISKIFKDMDAFTAFRFVFNTEITQKHVGATSLAQETQVTGSCLGNLLDVVSEIQLARIELKNLISTRFCTPLAEQLELELCFFDSKHCRKATVTLDTSCLRRGIYPSEIIPSQIDISVKEPQSSASLKDEIAAALQDLKVGYLRIQQLCRCISKLISSPIR 1211
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00515 1211 MobiDBLite consensus disorder prediction 266 291 - -
Sain12g00515 1211 MobiDBLite consensus disorder prediction 104 125 - -
Sain12g00515 1211 MobiDBLite consensus disorder prediction 34 50 - -
Sain12g00515 1211 MobiDBLite consensus disorder prediction 206 230 - -
Sain12g00515 1211 MobiDBLite consensus disorder prediction 915 947 - -
Sain12g00515 1211 MobiDBLite consensus disorder prediction 1 20 - -
Sain12g00515 1211 MobiDBLite consensus disorder prediction 58 75 - -
Sain12g00515 1211 MobiDBLite consensus disorder prediction 34 125 - -
Sain12g00515 1211 Pfam Knl1 RWD C-terminal domain 947 1099 IPR040850 -
Sain12g00515 1211 PANTHER OS06G0608100 PROTEIN 8 1207 - -
Sain12g00515 1211 MobiDBLite consensus disorder prediction 76 92 - -
Sain12g00515 1211 MobiDBLite consensus disorder prediction 717 744 - -
Sain12g00515 1211 MobiDBLite consensus disorder prediction 923 939 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00515 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
138753 Sain12g00515 Sain13g02304
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr12:11676913 Sain13g02304 Sain-Chr13:130615129 wgd