Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00521 | ATGAGTGGGGGTAGGGTTTCCATTCCAAACAATGTAAGGAAGACGATCCAGAACATCAAGGAGATCACAGGTAATCACAGTGAAGATGAGATATATGCAATGCTCAAAGATTGTTCCATGGATCCAAACGAGACCGCACAGAAGCTCCTCTTGCAAGATCCATTTCATGAAGTTAAGAGGAAGCGTGATCGCAAGAAGGAGAATCTGAATAAAGAATCTACAGAGCCTAAATGGAGACCTGGGATGCAGGGGCGGGGGAATAGGGGTGGCCGGGGGAACTACTCATCCCGCCACAGTTCTAATGATGCAGGTGGTGGAAGGGCACCTCTATCTGCAAAGGAGAATGGAATCAATCAAGGTTCAGAGGATCGTACAGTTGCGTCAATGCCTCAGGGTCAGAAGAATAAAGAGACATTTGCTGTTGCAAGCTCTTCCCGTGCTGTCGCCGATGGTTCATTTGATATATCTTCGTCAGTTGGAAGTGATAAGAAGCCATCTGAAGTGACTGTATCTACTGCGAGTAGTAAGATGGAGGGTACAGTGACACAACTTCCTCCTATTGAGGCGAGTAAGAGCACCACCGTTGCCTTGGGGTCTGGGAGTGCACATGGGCCGCTCATGTCGAGTTCCAATATACCATCACCTTCACCAGGGGTCTATTTGTCTGATTCAGATCCTATTTTGATGCCCTCACAAGATTCGCGGTTCCCAGTGGGTACGATCAGACGTGAAGTTGGTTGTCAGCGAACTCCAGTTGAACAGATTCATGAGACCCCCCACGAGATCAAATCAGCTGCTGCTGGTTCTGAGGGTGGGAACTCCTCCATGCAAGGGAAGGCACCCGGTGAGCTTCAAGGAGTGAGCAAGAGTTTGGTTTTGGAGTCTTCACGACCGGGAACATCTTCTCACGTCTCCTTTTCCATTGCCAGGCCTTCCTCAAACTATAATAATAGGCTGCAACAAGCAATTGGGCAGCAAAAAGTGGGCCCTGGTATGGAATGGAAACCAAAACCAACAAATCCTGTTCTTGCTCACGGGACTGGGTCCAGTGAGTCAATTAAGGTGCCTGCGGTTTCAACTAAAGGTCATACTCCGACCCAATCTGCATCCAGTAATCTTGATTCAAAGGATGCTACGAGTGAACTCGAGAGGAAGCTCGAGGAGTCGCACATTTCAGATGATCAACATGTTATTATCCCAAATCACCTTCATGTTCCTGAAGCCGAGAAACTCGGATTCTGCTTCGGGAGTTTCGATGCCAGTTTTGGTTTGAATGCAAGCTCCTCAAATGGTCCGGTGACCGACAAGAGTTCCGAGGCTTCTGAGGAGGTTGATGAAAGTATAGAGGAGCAGTCCAGAAACCAAAATGCTTTGGCAACGGCTGATGAAAGAGATCACCGTGACCGTCCTACGTCCTTTGGTAACGTACCTGAGAGTTTACCAGCTGAAGGCGATGTCTCATCAAATGCAGCCCCCGAGTACAGAGAATCCAAGCCAGAGACTTCACTCCCGACTTCAGGCCATCAATACCCAGTTGTTCATACATCTCCTAACTTCAGTTTCGGGTTCATGCCGCCAATGATTGGGAGCCAGCTTACGTCTTTTGAAAGCAACGAGTCTCAATCTCGTGATGGTTCTCACGTCCCAAGCTTCGTAGTTCAGCAACCGTTTGATCCAGCAAGCTATTATGCTCAATTCTATCGTTCTGGTGCTGATAATGATGGTCGTTTGTCACCCTTCCACTCTACCGGGGTTCCAACCAAATATAACGGAAATGTTGCAGTGTTATCTCCACAGGCTTCTCAATCTTCTCAAGAGGTTGGGAACTCGCTAATGTTGTCTGCTGCTGGTCCAACACCGATAGCCACACAAACTGCTGGTGTTATGCAAAACTCCATAGCAGTCACTCAGCAACCATTGCCGATTTTCAGGCAGCCGCCAACTGGGGTCCATTTGCCCCATTATCCTCCAAATTATATCCCATATGGTCCATATTTCTCCCCCTTTTACGTTCCTCCGCCAGCTATACATCAGTTTTTGAGCAACGGTGCATTCCCTCAACAACATCAAGGTGGCAGTATGTATCCAGCTCCACCAGTGGCAACTCCTAAATACCCACTTCCGCAATACAAGCCGGGAAGTAATACGGGTAACTCGACACACATGGGAATGGCTGGAAGCTATGGACCGTATGGTTCACCCCCTGCAAGTTATAATCCTGGCTCGGCTACTACAGCTGGAAATTCGACCTCCAATGAGGACCTTGGTGGGTCCCAGTTCAAAGAAAGCAATGTATACATCACTGGACAGCAGAGTGAAGGGTCGGGTGTATGGATCGCTGCACCTGGTCGAGACATGGCTAGTTCTTTCTATAATCTTCCTCAAGGTGGTCAAGTCGCATACACCCCAACACAAGCGGGCCATGGCACGTTTGCTAGTATTTATCACCCTGCACAACCAGTAACCACCGGAGCTGTTCACCCACTTCTCCAACAGTCCCAAACACTGGCGGCAGCGGGTGGTGGTGGTGTTGACATGGCGGCAGGTGGTGGTGTGTATCAGCAACCGCAACCTGCTCAAATAAACTGGCCTAATAACTATTGA | 2604 | 48.89 | MSGGRVSIPNNVRKTIQNIKEITGNHSEDEIYAMLKDCSMDPNETAQKLLLQDPFHEVKRKRDRKKENLNKESTEPKWRPGMQGRGNRGGRGNYSSRHSSNDAGGGRAPLSAKENGINQGSEDRTVASMPQGQKNKETFAVASSSRAVADGSFDISSSVGSDKKPSEVTVSTASSKMEGTVTQLPPIEASKSTTVALGSGSAHGPLMSSSNIPSPSPGVYLSDSDPILMPSQDSRFPVGTIRREVGCQRTPVEQIHETPHEIKSAAAGSEGGNSSMQGKAPGELQGVSKSLVLESSRPGTSSHVSFSIARPSSNYNNRLQQAIGQQKVGPGMEWKPKPTNPVLAHGTGSSESIKVPAVSTKGHTPTQSASSNLDSKDATSELERKLEESHISDDQHVIIPNHLHVPEAEKLGFCFGSFDASFGLNASSSNGPVTDKSSEASEEVDESIEEQSRNQNALATADERDHRDRPTSFGNVPESLPAEGDVSSNAAPEYRESKPETSLPTSGHQYPVVHTSPNFSFGFMPPMIGSQLTSFESNESQSRDGSHVPSFVVQQPFDPASYYAQFYRSGADNDGRLSPFHSTGVPTKYNGNVAVLSPQASQSSQEVGNSLMLSAAGPTPIATQTAGVMQNSIAVTQQPLPIFRQPPTGVHLPHYPPNYIPYGPYFSPFYVPPPAIHQFLSNGAFPQQHQGGSMYPAPPVATPKYPLPQYKPGSNTGNSTHMGMAGSYGPYGSPPASYNPGSATTAGNSTSNEDLGGSQFKESNVYITGQQSEGSGVWIAAPGRDMASSFYNLPQGGQVAYTPTQAGHGTFASIYHPAQPVTTGAVHPLLQQSQTLAAAGGGGVDMAAGGGVYQQPQPAQINWPNNY | 867 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00521 | 867 | MobiDBLite | consensus disorder prediction | 114 | 133 | - | - | |
| Sain12g00521 | 867 | MobiDBLite | consensus disorder prediction | 53 | 74 | - | - | |
| Sain12g00521 | 867 | PANTHER | FLOCCULATION PROTEIN (DUF1296) | 1 | 867 | IPR044277 | GO:0051082(PANTHER) | |
| Sain12g00521 | 867 | MobiDBLite | consensus disorder prediction | 427 | 511 | - | - | |
| Sain12g00521 | 867 | MobiDBLite | consensus disorder prediction | 154 | 234 | - | - | |
| Sain12g00521 | 867 | MobiDBLite | consensus disorder prediction | 154 | 218 | - | - | |
| Sain12g00521 | 867 | MobiDBLite | consensus disorder prediction | 52 | 133 | - | - | |
| Sain12g00521 | 867 | MobiDBLite | consensus disorder prediction | 343 | 376 | - | - | |
| Sain12g00521 | 867 | Pfam | GBF-interacting protein 1 N-terminal | 8 | 67 | IPR009719 | - | |
| Sain12g00521 | 867 | SUPERFAMILY | UBA-like | 8 | 70 | IPR009060 | GO:0005515(InterPro) | |
| Sain12g00521 | 867 | MobiDBLite | consensus disorder prediction | 250 | 283 | - | - | |
| Sain12g00521 | 867 | MobiDBLite | consensus disorder prediction | 326 | 390 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00521 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 138759 | Sain12g00521 | Sain13g02295 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:3514095 | Sain12g00521 | Sain-Chr12:11756189 | transposed | |
| Sain | Sain-Chr1:76302533 | Sain12g00521 | Sain-Chr12:11756189 | transposed | |
| Sain | Sain-Chr7:124740703 | Sain12g00521 | Sain-Chr12:11756189 | transposed | |
| Sain | Sain-Chr9:200764302 | Sain12g00521 | Sain-Chr12:11756189 | transposed | |
| Sain | Sain-Chr12:11756189 | Sain13g02295 | Sain-Chr13:130282292 | wgd |