Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sain12g00527	ATGAGTTATGGAATTAAGACATTTACAGTTAACAACCTTAACTGTAGCGAGTTATGGTCAAAGAGAGCTCCAATAGAGGCATCATTCTGTTCTTCTCGTTCCTTGAGTAAGTTCGGCCCTCTTCGTAGCTCCGGTGTATTCACACTCGGTGTTTCTGTTTTCGGTTATCCGAGAAGACTTCGCAATAATTTACTACACTCCGATTCAACTTTCCGGTACACCTTGTTGGTGTATCATGTAGTGCATGGGATGAGGAATGCTACTTTATCCAGTGATTCAGTAGTAGTTGATGAACTCAAATGTAAAGAGTGGGAAATTGGGGTTTTAAAGGATGAAATAGCAGCTATGCAGGGAATGCTGATAAGGAGAACACCGCCAACTGGACCTCCTCCTCACTATGTTGGTATTTTTGAGTTTTTACAGAATGAAGATAATACTCCTCGTAACAAACTAGAGGAAATTGTATGGTACAAATATGTAGAGGTTAATCAGATGAAGGAGAAAAATGCATTATGTTCACTAAAGAATGCACTCGACAATGCTCCTCCTCCGAGAGACTTTGTAAGATCTCTTAAGGAAGCATATTTACGAACAGGATTGCCGGGTTTAATCGCTGAAGTAAAAAAGGCTTCACCTAGTAGAGGAGTTATAAGGGAAAATTTTCATCCTGTGGAAATTGCAAAAGCTTATGAGAAAGGTGGAGCAGCATGCCTAAGTGTTTTGACCGATGCAAAATATTTTCAGGGAAGCTTCGAGAATCTAGAGGCTATACGGAATGCTGGAGTCAAGTGCCCTCTCTTGTGCAAAGAATTCATTGTGGATGCATGGCAACTCTACTATGCTCGAACAAAGGGCGCCGATGCTGTTCTGTTGATTGCCGCTGTTTTACCTGATATTGACATCAAATATATGCTTAAGATATGCAAAAAGCTTGGACTGGCTGCACTTGTTGAGGTACATGATGAGAATGAAATGGATCGCATGCTTGCAATTGATGGAATTGAACTCATTGGCATCAACAATCGTAACCTTGGAACTTTCAAAGTTGATATCGGTAACACAAAGAAGTTGCTTGAAGGTGAGCGTGGGGATAAGCTCCGTCAGAAAAACATAATAGTGGTTGGGGAGTCTGGGCTGTTCACTCCTGCTGACATTGCCTATGTACAAGAAGCTGGTGTGAAAGCTATATTGGTCGGGGAGTCGATTGTGAAGCAGGAGGATCCAACAAAAGGAATTAGAGATCTCTACGGAAAAGATATATCGGCTTAG	1269	41.53	MSYGIKTFTVNNLNCSELWSKRAPIEASFCSSRSLSKFGPLRSSGVFTLGVSVFGYPRRLRNNLLHSDSTFRYTLLVYHVVHGMRNATLSSDSVVVDELKCKEWEIGVLKDEIAAMQGMLIRRTPPTGPPPHYVGIFEFLQNEDNTPRNKLEEIVWYKYVEVNQMKEKNALCSLKNALDNAPPPRDFVRSLKEAYLRTGLPGLIAEVKKASPSRGVIRENFHPVEIAKAYEKGGAACLSVLTDAKYFQGSFENLEAIRNAGVKCPLLCKEFIVDAWQLYYARTKGADAVLLIAAVLPDIDIKYMLKICKKLGLAALVEVHDENEMDRMLAIDGIELIGINNRNLGTFKVDIGNTKKLLEGERGDKLRQKNIIVVGESGLFTPADIAYVQEAGVKAILVGESIVKQEDPTKGIRDLYGKDISA	422

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sain12g00527	422	ProSitePatterns	Indole-3-glycerol phosphate synthase signature.	203	221	IPR001468	GO:0004425(InterPro)\|GO:0006568(InterPro)
	Sain12g00527	422	FunFam	Indole-3-glycerol phosphate synthase chloroplastic	143	421	-	-
	Sain12g00527	422	SUPERFAMILY	Ribulose-phoshate binding barrel	158	417	IPR011060	-
	Sain12g00527	422	Hamap	Indole-3-glycerol phosphate synthase [trpC].	149	417	IPR013798	GO:0004425(InterPro)
	Sain12g00527	422	Pfam	Indole-3-glycerol phosphate synthase	151	415	IPR013798	GO:0004425(InterPro)
	Sain12g00527	422	CDD	IGPS	191	415	IPR013798	GO:0004425(InterPro)
	Sain12g00527	422	Gene3D	Aldolase class I	143	421	IPR013785	-
	Sain12g00527	422	PANTHER	TRYPTOPHAN BIOSYNTHESIS PROTEIN	92	418	IPR045186	GO:0000162(PANTHER)\|GO:0004425(InterPro)\|GO:0004425(PANTHER)\|GO:0004640(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sain12g00527	K01609	indole-3-glycerol phosphate synthase [EC:4.1.1.48]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	138761	Sain12g00527	Sain3g00495

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Sain	Sain-Chr12:11838613	Sain3g00495	Sain-Chr3:12028529	wgd