Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00533 | ATGGCGGCAATACTGGCTTCTAACAGCTGCTATTGCCGTGATGTGCAATTGGTAAATCAAGGGAGAACAACGGACAATCTCAGCTTCTCAAGATCAATTTCTACCCTGAAGTTGGATAGGCATGACTGTACTTTGCCTAAAGTGGAGAGGTTTCACAGGTTTCATGTTGAGATGCAACAGACAGAATCACCCCTGAAATCTGGTATCAATGGCCGACCTGCAAAGTTGGATACAAATGGTCAACCTGTGAAGTTGGGTGCCAATGGTAAACCGGTGAATTTGGGTGCCAATGGTCAACCTGTAAAGTTGGGAAGCAACGGTCAAGCAATCACGATGGTACCTACCAGTGAGGTGGTGAAAAACAAGCCTCTATCCAAACAAAGAGCAGGGGTAGTAAATGGATCAACACAAGTTGTTAATGGAACAAGTATTGTTAAGACAGCAACCACTCCGGCCCCTGTTAAATCTGTAAAAATTAGAGAACCCACAGGATTTCCACCTTCTGAAGAATTGAAGGTCTTGCCATCAGATGAAAGTTTCAGCTGGGCAAATGAAAGTTATAATTCAGTACAAAGATCAATAGACGTGTGGTCTTTTGTTCTTTCTCTTCGTGTTCGTGTTCTCTTCGACAATGCAAAATGGGCGTATCCTGGAGGCTTCACAGAGGACAAACAGAAAATCAGAAGAAGGAAAACAGCTGCATGGTTAAGGGAGTGTGTGCTTCAACTTGGGCCAACCTTTATCAAACTTGGGCAGTTATCTTCAACAAGGTCAGATCTATTTCCACGTGAATTTGTTGATGAGCTCGCCAAGTTACAGGACAGAGTACCGGCCTTTTCACCAGCAAAAGCCAAAGGTTTCATAGAGAAAGAATTAGGAGCTCCAGTTGATGTAATCTTCAAGGAGTTTGAAGAACGACCAATTGCAGCTGCTAGTCTGGGTCAGGTACATCGTGCAATATTACATAATGGAGAAAAGGTAGTTATTAAAGTTCAAAGACCTGGTCTGAAGAAGCTTTTTGACATCGATTTACGAAATTTAAAGCTAGTTGCGGAATATTTTCAAAGAAGTGAATCTCTCGGTGGCCCGACACGGGACTGGATAGGCATCTATGATGAATGTGCAAAGATTTTGTACGAGGAGATTGATTACATAAATGAAGGGAAAAATGCTGATAGATTTCGTCGAGATTTTCGTAATATAAAGTGGGTCCGAGTGCCTCAAGTATTCTGGGATTATACGGCACAAAAGGTGCTGACATTGGAGTATGTTCCAGGCATTAAGATTAATAACTTAGATGCGATAAAAGAAAGGGGTTTCAGTCGATCCCAAATCTCTTCGCACGCCATTGAATCGTACTTGATTCAGATACTGAAAACAGGTTTCTTTCATGCTGATCCTCATCCTGGAAATCTTGCTATCGATGTGGATGAATCATTAATCTACTATGATTTTGGCATGATGGGGGAGATTAAGTCCTTCACAAGAGAAAGATTGATGGATCTTTTCTATGCAGTTTATGAAAAAGATGCGAAAAAGGTTATGAACAGTTTGATAAGTCTTGAAGCGCTTCAACCTACTGGAGACATGTCAGCAGTTAGGAGATCTGTTCAGTTCTTTTTGGATAATTTGCTGAGTCAGTCACCAGATCAGGAGACCACTTTGGCTGCAATAGGCGAGGATTTATTTTCTATAGCAACAGATCAGCCTTTCCGGTTCCCATCCACCTTCACATTTGTAATTAGGGCATTTTCCACTCTTGAAGGAATTGGCTACTCACTCGATCCAGATTTTTCATTCGTCAAGATTGCTGCGCCTTATGCACAGGAGCTGTTAGATCTCAAACAACAGCGGCGCAGTGGAACACAACTTGTCCAGGAAATACAAAAACAAGCCAATGACGCAAGATCATACACCATGTCGATGCCTTACAGAGTTCAGCGGATCGAAGAGTTTGTGAAACAACTAGAATCAGGAGATGTTAAACTTCGTGTCAGAGTTCTTGAGTCTGAACGAGCAGCTCGGAAGGCAACAATATTGCAAATGGCAACCTTATACACGGTTATTGGGGGTACACTCGTAAACATAGGGGTCACATTTAGCAGCCAAGGCAGCCAACTTATAGCAAATGGGTCATTTGTTGCTGCAGGTGTTTTCATAACCCTGCTCCTTAGGTCCATGCAAAGGGTGAAGAAGCTTGATAAAATTGAAAAGATGATATAG | 2223 | 42.2 | MAAILASNSCYCRDVQLVNQGRTTDNLSFSRSISTLKLDRHDCTLPKVERFHRFHVEMQQTESPLKSGINGRPAKLDTNGQPVKLGANGKPVNLGANGQPVKLGSNGQAITMVPTSEVVKNKPLSKQRAGVVNGSTQVVNGTSIVKTATTPAPVKSVKIREPTGFPPSEELKVLPSDESFSWANESYNSVQRSIDVWSFVLSLRVRVLFDNAKWAYPGGFTEDKQKIRRRKTAAWLRECVLQLGPTFIKLGQLSSTRSDLFPREFVDELAKLQDRVPAFSPAKAKGFIEKELGAPVDVIFKEFEERPIAAASLGQVHRAILHNGEKVVIKVQRPGLKKLFDIDLRNLKLVAEYFQRSESLGGPTRDWIGIYDECAKILYEEIDYINEGKNADRFRRDFRNIKWVRVPQVFWDYTAQKVLTLEYVPGIKINNLDAIKERGFSRSQISSHAIESYLIQILKTGFFHADPHPGNLAIDVDESLIYYDFGMMGEIKSFTRERLMDLFYAVYEKDAKKVMNSLISLEALQPTGDMSAVRRSVQFFLDNLLSQSPDQETTLAAIGEDLFSIATDQPFRFPSTFTFVIRAFSTLEGIGYSLDPDFSFVKIAAPYAQELLDLKQQRRSGTQLVQEIQKQANDARSYTMSMPYRVQRIEEFVKQLESGDVKLRVRVLESERAARKATILQMATLYTVIGGTLVNIGVTFSSQGSQLIANGSFVAAGVFITLLLRSMQRVKKLDKIEKMI | 740 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00533 | 740 | CDD | ABC1-ADCK3-like | 271 | 518 | - | - | |
| Sain12g00533 | 740 | SUPERFAMILY | Protein kinase-like (PK-like) | 273 | 521 | IPR011009 | - | |
| Sain12g00533 | 740 | PANTHER | CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED | 139 | 672 | IPR050154 | GO:0046467(PANTHER)|GO:0055072(PANTHER)|GO:1901031(PANTHER) | |
| Sain12g00533 | 740 | Pfam | ABC1 atypical kinase-like domain | 271 | 517 | IPR004147 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00533 | K03688 | ubiquinone biosynthesis protein | ||||
| Sain12g00533 | K08869 | aarF domain-containing kinase |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 138764 | Sain12g00533 | Sain13g02289 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr11:181257641 | Sain12g00533 | Sain-Chr12:11906045 | dispersed | |
| Sain | Sain-Chr12:11906045 | Sain4g01159 | Sain-Chr4:34819468 | dispersed | |
| Sain | Sain-Chr11:72590951 | Sain12g00533 | Sain-Chr12:11906045 | transposed | |
| Sain | Sain-Chr12:11906045 | Sain13g02289 | Sain-Chr13:130177790 | wgd |