AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00543 ATGTCTAATAGAGCCATGGCTTCCTACAAGAAACTACGTATGAGAGATGGCGCGGTTCGTCGGTTCCTCTTTGTGGTATCTTTAACTTTGGCTGGGGTTCTTCTGTTATTTTTTCTTGTTGGAATGAATTCAAGTAGTGAGTTATTGGAAGAAAACTCGATCGAAATCAATAGTATTAGTGGAGTTAGCTCTAACATATCTGGTTTGTTTGAGAGTAGTATCAAGCTTCCTAAACATAATTATTTGTCGAAAAAGTTGGAGAAGATGAACCAGTTGCCACCAAGAAACATGGATTTGTATCCAAATTTAGCTAAAGATCGTATAGTTATCGTTCTTTATGTTCACAATCGCCCCCAATATCTCAAATTAGTCGTGGATAGCCTTTCTCGTGTGTCGGGTATTAATGAAACTTTGTTGATCGTAAGTCACGATGGATATTTCGAAGCAATGAACAAGATTGTGGAGGGTATTAAGTTTTGTCAAGTGAAACAAGTATTTTCTCCTTATTCGCCCCATATATTTTCGAATAGCTTTCCTGGCGTATCCCCTAATGATTGCAAGGAAAAAGATGATCCGATTGAGAAAAACTGTGAAGGGAGCTCGGATCAATATGGGAATCATCGGTCGCCCAAGATTGTGTCGTTAAAGCATCATTGGTGGTGGATGATGAACACGGTTTGGGATGGACTAAAAGAAACAATCGGCCATTCGGGTGATATTCTTTTCATAGAAGAAGATCATTTCATCTTCCCAAATGCTTATCGAAACTTAAAGATTCTTACAGAATTGAAACCTACCAAATGCCCCGATTGTTACGCTGCAAATCTTGCTCCAAGTAACGTGAAATCAAGAGGAGAGGGTTGGGATAGTTTGATTGCTGAGCGGATGGGTAACATTGGTTACACGTTTAATCGGACTGTGTGGCGGAAAATCCATAGAAAAGCTAAGGAGTTTTGTTTCTTTGATGATTATAATTGGGATATAACCATGTGGGTGACTGTTTATCCTTCATTTGGTGGCCCGGTTTACTCTATGCGTGGACCAAGGGCTAGCGCGGTTCACTTTGGGAAGTGCGGGTTGCACCAGGGTCAGGGTGAGAACGCGGCTTGTGTTGATAACGGTGTGGTGAAGATTGAAACCGAAGAGATTGATAAGGTTGCAAACATTAAACCAGAATGGGGAGTTCATGTGTTTAGAAATCAAGATGGGTATCAAGCTGGATTTAGAGGGTGGGGAGGGTGGGGAGATAAAAGAGACCACCAATTGTGTTTGGATTTCGCCAAAATGTATCACTCAAGGAGGAAAGCGTCTGCCGCCTGA 1320 41.44 MSNRAMASYKKLRMRDGAVRRFLFVVSLTLAGVLLLFFLVGMNSSSELLEENSIEINSISGVSSNISGLFESSIKLPKHNYLSKKLEKMNQLPPRNMDLYPNLAKDRIVIVLYVHNRPQYLKLVVDSLSRVSGINETLLIVSHDGYFEAMNKIVEGIKFCQVKQVFSPYSPHIFSNSFPGVSPNDCKEKDDPIEKNCEGSSDQYGNHRSPKIVSLKHHWWWMMNTVWDGLKETIGHSGDILFIEEDHFIFPNAYRNLKILTELKPTKCPDCYAANLAPSNVKSRGEGWDSLIAERMGNIGYTFNRTVWRKIHRKAKEFCFFDDYNWDITMWVTVYPSFGGPVYSMRGPRASAVHFGKCGLHQGQGENAACVDNGVVKIETEEIDKVANIKPEWGVHVFRNQDGYQAGFRGWGGWGDKRDHQLCLDFAKMYHSRRKASAA 439
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00543 439 PANTHER BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE II 19 432 IPR007754 GO:0000139(PANTHER)|GO:0005795(InterPro)|GO:0006487(PANTHER)|GO:0008455(PANTHER)|GO:0008455(InterPro)|GO:0009312(InterPro)|GO:0016020(InterPro)
Sain12g00543 439 Pfam N-acetylglucosaminyltransferase II (MGAT2) 86 423 IPR007754 GO:0005795(InterPro)|GO:0008455(InterPro)|GO:0009312(InterPro)|GO:0016020(InterPro)
Sain12g00543 439 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 107 367 IPR029044 -
Sain12g00543 439 SUPERFAMILY Nucleotide-diphospho-sugar transferases 106 431 IPR029044 -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00543 K00736 alpha-1,6-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [EC:2.4.1.143]