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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00562 ATGGCTCTTCAGTCCATGGGAAGGCAAGGTGGCAACTCGATGGCGGTAGGAGGCGGTGGTGGTGGTTCTTCGTCTATTGCTCTTCTGCAAGAAAGATTCCGGCAGCTGGAGAAAATGAGGGAGAAGAGAGAAGAAATGGAGCTATTAAAGTTATTTCCTGGGTCTGAAACCACTAGTCAAAGTCAAACTAACCATTATGAACCACCAGAGATGATCTTCCGTAAGCCAACTAAAAAAACGATCAAGACCACAAAACCATGTTTTCAAGATCCGCTCTCTCTTGGACTCGACTTATACACAAAGCAAGCAGAACCGAAAAAACCTGCAAAAACGCAACCGTTCATGGACTTGTGGTCAGTAGATTCAACGTCTGTGAGCACGATGCGGGCTCATGACAAACCTGAAGTTGACACCTCCCTTCATCTCTAG 429 46.15 MALQSMGRQGGNSMAVGGGGGGSSSIALLQERFRQLEKMREKREEMELLKLFPGSETTSQSQTNHYEPPEMIFRKPTKKTIKTTKPCFQDPLSLGLDLYTKQAEPKKPAKTQPFMDLWSVDSTSVSTMRAHDKPEVDTSLHL 142
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00562 142 PANTHER OS03G0593100 PROTEIN 6 142 - -
Sain12g00562 142 Coils Coil 26 49 - -
Sain12g00562 142 MobiDBLite consensus disorder prediction 53 67 - -
Sain12g00562 142 MobiDBLite consensus disorder prediction 48 70 - -
Sain12g00562 142 MobiDBLite consensus disorder prediction 1 24 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00562 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
138772 Sain12g00562 Sain3g00476
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr12:12542091 Sain3g00476 Sain-Chr3:11626628 wgd