Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00568 | ATGTTTCTTGTTTCCTACCAAAAATTTTCAAACCCTTCTTCATCTTCCCTCCAAACTTCAAAAATCAAACTCACACCTCCATTAATTCACTCTCTATTTATATCCAACTCAAAACCACGCCTCAATCTCAACGCCCCACTTCCCAATAACAACAACATGTCGCTGAAACCCACTCTTAATCACAGTGATCGCGATCTCATCGCCCACCCTCTTCGTCCTTCCGGCGAGATTCATGTCATCGTCGGCCCTATGTTTGCCGGTAAAACTACAGCTCTTCTTCGCAGGATCAAATCTGAAGGAGCTAATGGCAGGAAGGTAGCAATGATAAAGTCTAGCAAAGATAACCGATATGCTGTAGATTCAGTTGTAACTCATGATGGGACAAAATACCCATGTTGGGCTCTGCCTGATTTGTTATCTTTCAAACAAAAACTTGGAGAAGAAGCTTATGAAAAGCTGGATGTTATTGGCATAGATGAGGCTCAATTCTTTGATGATCTCTATGACTTTTGTTGTAAAGCTGCTGACCATGATGGAAAAACTGTTATAGTTGCTGGCCTTGATGGTGATTACTTAAGAAGGAACTTTGGTCCAGTTCTTGATCTAGTACCCCTTGCTGATACCATAACCAAATTAACCGCTCGATGTGAACTTTGCGGCAAACGAGCCCATTTCACCTTAAGGAAAACCAACGAGACCAAAACCGAACTCATAGGTGGCGCTGATGTGTACATGCCCGTTTGCCGCCAGCATTATGTTAACGGACAAATAGTGATCAAAGCTGCTAGAAATGTTCAAGATGAATCTCATAAGTTTCAGAGCGAACAGAACAAGAACCAATCTCAACTATTGTAA | 855 | 41.87 | MFLVSYQKFSNPSSSSLQTSKIKLTPPLIHSLFISNSKPRLNLNAPLPNNNNMSLKPTLNHSDRDLIAHPLRPSGEIHVIVGPMFAGKTTALLRRIKSEGANGRKVAMIKSSKDNRYAVDSVVTHDGTKYPCWALPDLLSFKQKLGEEAYEKLDVIGIDEAQFFDDLYDFCCKAADHDGKTVIVAGLDGDYLRRNFGPVLDLVPLADTITKLTARCELCGKRAHFTLRKTNETKTELIGGADVYMPVCRQHYVNGQIVIKAARNVQDESHKFQSEQNKNQSQLL | 284 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00568 | 284 | FunFam | Thymidine kinase | 71 | 212 | - | - | |
| Sain12g00568 | 284 | Pfam | Thymidine kinase | 75 | 252 | IPR001267 | GO:0004797(InterPro)|GO:0005524(InterPro) | |
| Sain12g00568 | 284 | Gene3D | - | 69 | 212 | IPR027417 | - | |
| Sain12g00568 | 284 | FunFam | Thymidine kinase | 213 | 255 | - | - | |
| Sain12g00568 | 284 | ProSitePatterns | Thymidine kinase cellular-type signature. | 239 | 252 | IPR020633 | GO:0004797(InterPro)|GO:0005524(InterPro) | |
| Sain12g00568 | 284 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 213 | 255 | - | - | |
| Sain12g00568 | 284 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 75 | 213 | IPR027417 | - | |
| Sain12g00568 | 284 | Gene3D | - | 213 | 254 | - | - | |
| Sain12g00568 | 284 | PANTHER | THYMIDINE KINASE | 69 | 275 | IPR001267 | GO:0004797(PANTHER)|GO:0004797(InterPro)|GO:0005524(InterPro)|GO:0046104(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00568 | K00857 | thymidine kinase [EC:2.7.1.21] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:12702208 | Sain14g02471 | Sain-Chr14:104968481 | dispersed |