Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00573 | ATGGGTAAATTCTTAAGTCTTCTTTTTTGCGTTCTGATTTCGAATTTAGCCCAATTTTATGCTCAAAATTGCAGCAATTATGCCTTTTCTAACAACACCATCTACGCCTCATGTGTCTCTTTACCTGTTTTGAACACGCATCTCCACTGGAATCTCCACCCAAATCGCACCGTCGACGTGGCTTTCCGACACACTGGATCCAATTCATCTCAATGGGTTGCGTGGGGACTTAATATTAACGGGTCGCGTATGATTGGGACTCAAGCTCTTGTGGCTGTTACCAGCTCAAACGGGTTGGTTCGGGCTTATACCACATCGGTAACCGGGTTTGGAACCAGTTTGCAACCCGGAAATTTGAGTTTTGGGGTGGAAGGGATAAGGGCGCAGAGTGTTAGTGGAGATGTGGTGATTTTTGCGACGTTGGTGTTGCCAAGTGGACGGACGAGATTTAATCAGACGTGGCAGGTGGGTCCGGTTACTAATGGAACTCCAACGATTCATCCGATGGGGAATGATAATCGGGGTTCTTTTGGAACGGTGGATTTTTCAACCGGTGATGCTAGTGGGTCGCCGCCGGCGCCGACTCCGACGATACCGGCGACACCGACGACGGGAAATGATTGCAGCAATTTTGCCTTCGCCAACAACACAAACTACGTCACATGCGTTTCTTTACCTGTTTTGAACTCGCATCTCAACTGGAACTACAACATCAACCGCACCGTCGATGTGGCTTTCCGGCATGCTGGATCCGAAACATCTCAATGGGTTGCTTGGGCGCTCAACCTTCAACGGTCGGGTATGCTTGGGGCTCAAGCTCTTGTGGCTGTAACCAGCGCAGACGGGTCGGTTCGGGCTTATACTTCATCCGTAGACGGCTATGGAACTAGTCTGCAACCCAGCAACTTGAGTTTTGAAGTGCCCAGGATAAGTGCGGAGCGGGTCGGTGGCGATGTGGTGATTTACGCCACCATCGTGTTGCCTAATGAAGGGACGACATTTAATCAGGTATGGCAGGTGGGTCCAGCTAATGGCGGAAATCCGACTATTCACCCGTTGACGGCTGATAATCGGGGTTCTGCCGGAACGGTGAATTTTCTAACCGGTCAGGCCGACGGCGCCGGTAATGTTGGTGGGTCCCGGCAGCGGCGGAGAAACACTCATGGAGTGTTGAATGCGGTTAGTTGGGGAGTATTGATGCCCATGGGAGCCATGGCAGCAAGATATTTGAAGGTGTTTAAAATAGCTAATCCAGCCTGGTTTTACATCCATGCTGCTTGCCAAACTTCAGCCTATATCGTCGGTGTTGCTGGATGGGCCACCGGACTCAAACTTGGCGGTGACTCTACCGGAATCCGATACAATAAGCACCGGAACATTGGGATCACCCTCTTTGCAATTGGAACACTTCAGGTTTTTGCCCTTCTTTTGAGGCCTAAACCGGATCACAAATACAGACTTTACTGGACCATCTACCACCAGACCCTTGGATACTCGGTGATCGTTCTGAGCATTATCAATGTGTACGAAGGGCTTGATATCTTGGACCCGGAGAAGAAGTGGAAGAATGCGTACACGGGAATACTAATCTCTTTGGGGGTTATGACAGTTGTGTGGGAAGCTTTAACATGGTACATTGTTTTGAAGAGGAAGCAGGAAGATAAAAGAACACATGCAGGAGCCAATGGAGTCAATGGTTCGTCGTATGCTGCCAATGGATACGGGCAGTCGGCATAG | 1737 | 49.8 | MGKFLSLLFCVLISNLAQFYAQNCSNYAFSNNTIYASCVSLPVLNTHLHWNLHPNRTVDVAFRHTGSNSSQWVAWGLNINGSRMIGTQALVAVTSSNGLVRAYTTSVTGFGTSLQPGNLSFGVEGIRAQSVSGDVVIFATLVLPSGRTRFNQTWQVGPVTNGTPTIHPMGNDNRGSFGTVDFSTGDASGSPPAPTPTIPATPTTGNDCSNFAFANNTNYVTCVSLPVLNSHLNWNYNINRTVDVAFRHAGSETSQWVAWALNLQRSGMLGAQALVAVTSADGSVRAYTSSVDGYGTSLQPSNLSFEVPRISAERVGGDVVIYATIVLPNEGTTFNQVWQVGPANGGNPTIHPLTADNRGSAGTVNFLTGQADGAGNVGGSRQRRRNTHGVLNAVSWGVLMPMGAMAARYLKVFKIANPAWFYIHAACQTSAYIVGVAGWATGLKLGGDSTGIRYNKHRNIGITLFAIGTLQVFALLLRPKPDHKYRLYWTIYHQTLGYSVIVLSIINVYEGLDILDPEKKWKNAYTGILISLGVMTVVWEALTWYIVLKRKQEDKRTHAGANGVNGSSYAANGYGQSA | 578 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00573 | 578 | Gene3D | - | 363 | 558 | - | - | |
| Sain12g00573 | 578 | ProSiteProfiles | DOMON domain profile. | 228 | 341 | IPR005018 | - | |
| Sain12g00573 | 578 | SMART | 561-7 | 387 | 512 | IPR006593 | - | |
| Sain12g00573 | 578 | FunFam | Cytochrome b561 and DOMON domain-containing protein | 366 | 556 | - | - | |
| Sain12g00573 | 578 | Pfam | Protein of unknown function (DUF568) | 268 | 366 | IPR045265 | - | |
| Sain12g00573 | 578 | Pfam | Protein of unknown function (DUF568) | 84 | 182 | IPR045265 | - | |
| Sain12g00573 | 578 | CDD | DOMON-CIL1-like | 35 | 184 | IPR045265 | - | |
| Sain12g00573 | 578 | PANTHER | CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN | 203 | 552 | - | - | |
| Sain12g00573 | 578 | CDD | DOMON-CIL1-like | 219 | 368 | IPR045265 | - | |
| Sain12g00573 | 578 | ProSiteProfiles | DOMON domain profile. | 44 | 157 | IPR005018 | - | |
| Sain12g00573 | 578 | Pfam | Eukaryotic cytochrome b561 | 388 | 512 | IPR006593 | - | |
| Sain12g00573 | 578 | ProSiteProfiles | Cytochrome b561 domain profile. | 347 | 548 | IPR006593 | - | |
| Sain12g00573 | 578 | CDD | Cyt-b561-FRRS1-like | 360 | 541 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00573 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 138776 | Sain12g00573 | Sain3g00466 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:12749692 | Sain13g02235 | Sain-Chr13:129207329 | dispersed | |
| Sain | Sain-Chr12:12749692 | Sain3g00466 | Sain-Chr3:11065730 | wgd |