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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00598 ATGAGGAAGCTCTACAACCACAATAAAGGCAAAATCCACCCATCACCACCGCCGCCGGCCACCACCACCACCGCCGACCACTTATCTTTGCTACCGGTGGCTATAGCCACTCTCGCCGCTGCCCTTGCACCAGAAGACAAAGAAGTCTTGGCATACCTTCTCTCATGCTCTCTAACCACCACCACCAACACCAACAACAATAATAAAAACCTCCCCGGCAACACCAAAACCGGCGGCGGAGACGGAAACCATCCTCCTCAATTCAATTGCAACTGCTTTACATGCTACATCAGTTACTGGGTTCGTTGGGATGCTTCGCCAAACCGACAAATGATTCATGAAATCATCGATGCTTATGAAGATGGATTGATTCATAACAAGAAGAGTGGGAAGAACAAGAAGGAAAAAAAGAAAAATAAAGTTTCTTCATCTTCCGCTTCTCCATACGCGCCGCTTTCCGCCGCCGAGAAGGTCTCTCACGCGCCACCGAAAGTTGCGGAAAACAAGATTGAAGATAACGATGGCGATGGTCAAGTTGAATTGATCATGGGGTCATCTACAGAGAAAGGGTCGATAAGAAAATTTGTAAGTTTCTTAGGAGAAAGGATTTGGGGTGTTTGGAGCTGA 627 47.37 MRKLYNHNKGKIHPSPPPPATTTTADHLSLLPVAIATLAAALAPEDKEVLAYLLSCSLTTTTNTNNNNKNLPGNTKTGGGDGNHPPQFNCNCFTCYISYWVRWDASPNRQMIHEIIDAYEDGLIHNKKSGKNKKEKKKNKVSSSSASPYAPLSAAEKVSHAPPKVAENKIEDNDGDGQVELIMGSSTEKGSIRKFVSFLGERIWGVWS 208
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00598 208 MobiDBLite consensus disorder prediction 162 176 - -
Sain12g00598 208 PANTHER F12F1.11-RELATED 1 208 - -
Sain12g00598 208 MobiDBLite consensus disorder prediction 127 177 - -
Sain12g00598 208 MobiDBLite consensus disorder prediction 1 22 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00598 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
138782 Sain12g00598 Sain3g00445
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr12:13693329 Sain9g03839 Sain-Chr9:207833506 dispersed
Sain Sain-Chr1:106640856 Sain12g00598 Sain-Chr12:13693329 wgd
Sain Sain-Chr12:13693329 Sain3g00445 Sain-Chr3:10517646 wgd