AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00614 ATGGATTCTACAGATGCTAATGGGGGAAGAGTAGGTACAGAAGAGCTAGATCATGCTCTTATGGTAGAAATGGCGTCAATTGCCGGTTCGGATTTAGGTCCGAATACGGTTTCGGTTGTGGAGGATCAGAGAACGCCTCTTTTGACGCAAGCGGACAATCCTAGACTCAATATCTTTTCTGTCTCTTACCCTAAACGGAAAACTGACAAGGACCAAGTTACGAGATCAGTTGAAACGGAGACATCACCGTTTACGCTGTTTATAATGTGGACATGGTCTGGATCTAGATATTCTGGTTTGCTATGCATGGCCTTATCGTCTTCGGTCTACTGTTTCATGGGAATTCTTTCGGATGTGTTCTCTGTTCAAGCAATTCCTCTTTTTGAGATAGCATTTGCAAGATGTATAATTGTCTCGGCATTATCATTCATCTGGTTAAGAAGAAGTGCACAGCCAATATTTGGACCTCCAAATGTGAGGAGCCTTTTTGTCTCCAGAGCTGTTACTGGCTGTATTTCTTTGTTGACTTTCATTTACTGTATTCAAAAGTTACCACTGCCTCAAGCCATGCTTTTGAGCTTTACAACTCCAATAATGGCCTCAGTTTCAGCAAGATTCATTCTGCATGAGAATTTGAAAATTGCAGAAATAGCAGGTATTGCTTTGAGTTTCTTTGGTGTAATCTTTATCCTCCGATCAATGATCAGCACGCAAGGTACAGAACATATTTCAGCCGTGCATGGAATACATCATGTTTATGTAGTTTTAATTGGTTTATTATCATCATTGGCTGGTGGACTGAGTTACTGCCTTATAAGAGCTGGAGCAAAGTCATCTGAGCAACCTGTGGGCACTATATTTTCATTTGGCCTACTCACTAGTCCTGCTACAGCAATATGCATGATCACCTTTGAACGTTTTGTGCTGCCTAGCTTCTACTCGTTACTTCTTATGATTCTACTTGGTATATTGTCCTTCGTTGCTGAGTTGTTTCTGGCTCGTGGGCTTCAGCTTGAGAAAACTAGCAAAGTTGCAAATATACAATACCTTGAGGTGGCATTATCGGAGTTATGGGGACTGGCATCGTTACGAGTATCCCCTTTGTTCGGCGGAGTTGTTGGATGCTTGATGATATTGGTTTCAGCTTGTTGCACCATGTATTTGGGGCCTGAGAAAGACATGGAGTGA 1188 42.0 MDSTDANGGRVGTEELDHALMVEMASIAGSDLGPNTVSVVEDQRTPLLTQADNPRLNIFSVSYPKRKTDKDQVTRSVETETSPFTLFIMWTWSGSRYSGLLCMALSSSVYCFMGILSDVFSVQAIPLFEIAFARCIIVSALSFIWLRRSAQPIFGPPNVRSLFVSRAVTGCISLLTFIYCIQKLPLPQAMLLSFTTPIMASVSARFILHENLKIAEIAGIALSFFGVIFILRSMISTQGTEHISAVHGIHHVYVVLIGLLSSLAGGLSYCLIRAGAKSSEQPVGTIFSFGLLTSPATAICMITFERFVLPSFYSLLLMILLGILSFVAELFLARGLQLEKTSKVANIQYLEVALSELWGLASLRVSPLFGGVVGCLMILVSACCTMYLGPEKDME 395
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00614 395 PANTHER ACYL-MALONYL CONDENSING ENZYME-RELATED 89 386 - GO:0016021(PANTHER)
Sain12g00614 395 Pfam EamA-like transporter family 98 231 IPR000620 GO:0016020(InterPro)
Sain12g00614 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 134 232 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00614 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
138785 Sain12g00614 Sain3g00423
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr12:14018907 Sain3g00423 Sain-Chr3:10042231 wgd