Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00627 | ATGACGGCGAAGAAGAGATCCGTATCTTCTTCTTCGAGGCGCCAAATTCCGCCATTTGTTTCTAAGTTTGTGATCTCATTGTTGATACTCTTTTGTTTCGTCGCCTTTCTCGGACTCTTCTCTCAATTTAAGCTTCAATCGTCCTCCGTACCCACCGGATTTTATTTTGACGACTTCCGTCTCGAAGATTATCGTATGAAGATTGCTTTCCTTTTTCTTGTTCGAGATAATCTCCCTCTCGATTTCCTTTGGCACAACTTCTTTAAGGAAGATGTTTTGAAAAGCTTGATTGAACATTTAAAGTTGACGAGCTTACAGAATGCAGATCCCGAGAATTTCACAATTTACATACACTCGAAGCCTGGTTTTGTGTTTGATGAGTCAGTTACCAGATCAGTCTTCTTCTACAACCGACAGTTGGAAAACAGTGTGGAGGTGGGTTGGGGTAAGCCAACTATGATTGAAGCAGAGAAGCTGCTGTTCAAGGCTGCGCTTAATGATCCAAGCAATCAGATATTTGTTCTCCTCTCTGACAGCTGTGTACCACTATATGATTTCAGTTACATATACACATATCTCATGTCGTCTCCAAGAAGCTTCGTGGACAGCTTCATTGATGTCAAGGAAAATCGCTATAATCCAGAGATGTCCCCTGACATACGTGAAGGCAAATGGCGGAAAGGATCCCAGTGGATCACATTGGTCAGAAGGCATGCGGAGATGGTTGCATATGATCATGTTGTTTTCCCAATCTTTGAGAAACACTGCAAGCGGCGACCACTTCTAGACTTGAGCAAGGGAAACGAGTCTCTTAAAGAACAGCAGCAACACAATTGCATCCCAGATGAACATTATGTTCCCACCTTACTTACAATGCGGGGTGTTGAAGATGAATTGGAGCGAAGAACATTAACCTATTCATTATGGAACCAGTCTACAGAAACGATGAATACACAAGCCTGGCATCCAGTAACGTTTGGTTATGCAAGTGCCAGCCAGAAACATATACAAGATATCAAGGATATCGACCATGTTTATTTCGAGTCTGAGAACCGGACCGAATGGTGTGGTACTAAATCTAGTAGCGGTTCTTGTTACTTGTTTGCGAGGAAGTTCTCGCGTGGTGCAGCTATGCGGCTTCTGACCAACGGGGTGGTTGGTCCGTATGATCCTAACACGTTGTTCCAAGACCTGACATAG | 1200 | 43.5 | MTAKKRSVSSSSRRQIPPFVSKFVISLLILFCFVAFLGLFSQFKLQSSSVPTGFYFDDFRLEDYRMKIAFLFLVRDNLPLDFLWHNFFKEDVLKSLIEHLKLTSLQNADPENFTIYIHSKPGFVFDESVTRSVFFYNRQLENSVEVGWGKPTMIEAEKLLFKAALNDPSNQIFVLLSDSCVPLYDFSYIYTYLMSSPRSFVDSFIDVKENRYNPEMSPDIREGKWRKGSQWITLVRRHAEMVAYDHVVFPIFEKHCKRRPLLDLSKGNESLKEQQQHNCIPDEHYVPTLLTMRGVEDELERRTLTYSLWNQSTETMNTQAWHPVTFGYASASQKHIQDIKDIDHVYFESENRTEWCGTKSSSGSCYLFARKFSRGAAMRLLTNGVVGPYDPNTLFQDLT | 399 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00627 | 399 | Pfam | Core-2-I-Branching enzyme | 110 | 339 | IPR003406 | GO:0016020(InterPro)|GO:0016757(InterPro) | |
| Sain12g00627 | 399 | PANTHER | CORE-2-I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED | 63 | 381 | IPR044174 | GO:0016757(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00627 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:14412780 | Sain8g02160 | Sain-Chr8:141613217 | dispersed | |
| Sain | Sain-Chr1:105814740 | Sain12g00627 | Sain-Chr12:14412780 | wgd |