Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00640 | ATGATTTACCTCTTCTTTTCGATTTTATTCATCGAAATGGTGATGATTCTCTTACTTCTGTTCAAAACCCCACTGCGAAAGCTTTTGATTATTGGGATCGATCGTATGAAACGAGGAAGGGCTCCATTGGTTGTGAAATCCGTCGGCGCCACCGTCTTCGTCATCATGATGTACAACGTTTACAGTGTAACGGAAATCCAGAGCCGTCCCCCTGACGCCATTAATCCAACCGATCAAATCATTCTCGCTTACCATATGCTCGAAGCTTCTCTCATGGGATTCTCGCTTTTTCTGTCACTGATGGTGGATAGGCTACATAATTACATAAGAGAACTTCGCATACTTAGAAAGACCATGGAGGCTGCAAAGAAACAAAACCGCGTAGCTGAGGATAGCAAGAACAAGGGTGCAGATGAGGTCAAGATCCTAAACGAAGAAACATCTAGGTTGCAGTCAGAGATCAAAAGGCTGGAAGCTGAATATGAAACGAAGGTAAAAGAGGTGAAATCTGCAGAAGCCAATTCGGTTGCTCTTAAAAATCAATCAGAAGGCTTTCTTCTTGAATATGACCGCCTGCTAGCCGAAAACCAGAATCTTAGAGACCAACTACGCTCCATTGATGAATGCTTGTCTCATTCCAACGGAAAGAAGGATACATGA | 660 | 43.18 | MIYLFFSILFIEMVMILLLLFKTPLRKLLIIGIDRMKRGRAPLVVKSVGATVFVIMMYNVYSVTEIQSRPPDAINPTDQIILAYHMLEASLMGFSLFLSLMVDRLHNYIRELRILRKTMEAAKKQNRVAEDSKNKGADEVKILNEETSRLQSEIKRLEAEYETKVKEVKSAEANSVALKNQSEGFLLEYDRLLAENQNLRDQLRSIDECLSHSNGKKDT | 219 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00640 | 219 | Coils | Coil | 140 | 174 | - | - | |
| Sain12g00640 | 219 | Gene3D | - | 136 | 199 | - | - | |
| Sain12g00640 | 219 | PANTHER | BCR-ASSOCIATED PROTEIN, BAP | 1 | 200 | IPR008417 | GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0006886(InterPro)|GO:0006888(PANTHER)|GO:0016020(InterPro)|GO:0070973(PANTHER) | |
| Sain12g00640 | 219 | Coils | Coil | 105 | 132 | - | - | |
| Sain12g00640 | 219 | FunFam | B-cell receptor-associated protein 29 | 136 | 199 | - | - | |
| Sain12g00640 | 219 | Coils | Coil | 189 | 209 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00640 | K14009 | B-cell receptor-associated protein 31 |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 138795 | Sain12g00640 | Sain13g02188 | |
| 138796 | Sain12g00640 | Sain3g00403 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:14817662 | Sain13g02574 | Sain-Chr13:137012051 | dispersed | |
| Sain | Sain-Chr1:105448462 | Sain12g00640 | Sain-Chr12:14817662 | wgd | |
| Sain | Sain-Chr12:14817662 | Sain13g02188 | Sain-Chr13:127882286 | wgd | |
| Sain | Sain-Chr12:14817662 | Sain3g00403 | Sain-Chr3:9621038 | wgd |