Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sain12g00650	ATGGAGAATAAAGATAAGATCAAAATCGCATTTACAATCACTTGTGTTGCTGTGGTTTCTATCGTACTCGCTAACAGATTTCGTAAACATCGAAAACGAAAACAGAACATAAGCTCTTGTTACCTGAAATCAGAAGCAAAACCGCAACACAATTTTAAGCGTGTTTTGGCCAGCAATTCGTACACTCCATTCAAGCACCTCAAGCTCGACGACAGTTCTACGGATTTGCATCCTTATGAGTCGGAGATCAAAGCTTTGTTGGAGAAACCTCAACTAGAATTTGAATTTTGTAATGCGTTTATGGATATGGACATGGACATGAGTGATACGTATGTTTGGGTTGATGATGAATCAAAGTTAGAAGAGCTTGTTGAGGTTTTGAGTAAAGAAAGAGTGTTTGCTGTGGATACTGAACAACATAGCTTACGTTCGTTCTTAGGGTTTACAGCTCTTATTCAGATCTCTACAAGAAAGGAAGATTTTTTGGTGGACACCATAGCTCTTCATGATGTTATGGGAATTCTTTGCCCTGTATTTGCCAATCCCAATATATGCAAGGTGTTCCATGGTGCTGATAATGATATTATATGGCTACAGAGGGATTTTCATATTTATGTTGTAAACTTATTTGACACTGCAAAGAGATCGTTGGCCTACTTACTTGAAACATATTGCGGTGTCACCACTAACAAGTTCTATCAGCGTGAAGATTGGCGACAACGGCCACTGTCAAAAGATATGGTTGAATATGCTCGTATGGATGCACACTATTTACTCTATATTGCAGATTGTCTTGTTGCTGAGCTGAAACTCCAGAAAAATGAAAATTCAGCCAGTCTTGAAGACAAATTCGATTTTGTTTTTGAGGCCAACCGGCGTTCCAATGCCTCATGTCTACAACTTTACACCAAAGATCTAGAAGCTTCCCCAGGGCAGTCTGCTGCATCTTCAATTATTTCTCGCCACTTGAATGATCACGGAAGTTCCACAAACACCAATCAAGAACTTATTAGACGTCTATGCTCTTGGAGGGATTTAATGGCCCGTATGCATGATGAGAGCCTTAAATATGTATTATCCGATAATGCTGTTGTCGCTCTTGCTGAAAAAGTTCCGTTAACTGCAACAGATATTTGCACTACAATATCACAAGCTGATATAGAGATGGATTCTGTCGGTTCTGATTCTTCCCCTCGGTTTCCATCCTCTGTTGTTTTAAGTCATTTGGATGACTTTCGTTATCTTCTTCAAGATGAGATGAACAATGTTGATGATATATTTCAACTAGTTCTTAAAAAGCACCTTGGTTCAAATGGTTCTTGTCCTTTTTCTCTTTATAACTATGGCTTATTGTCTAAAACCAACACCAAAGCATCCAAGAGATTAGTTTCAAAGAAAAATGGATATAAGTTTACAAAACAAGTTGCTCGGAAAGCTTCTCGAGAGCTTTTTGTCCAGAAGTTCTCTTGCAAATCTCCGGTCTATCACAACTGCAGGATATACGCCAACGATGGACGACTGTTGTGTTACTGTGATCGAAGGAAGTTAGAATGGTATTTGCAGCGAGATCTGGCAAAACTTGTGGATGAAGACCCACCAGCCATAATGCTACTTTTTGAACCCAAAGGTCGCCCCGAAGATGAAGGAAATGATTTCTATATTCAAAGCAAGAAAAACATATGTGTAGGATGTGGTGAAGGAAATCACTATTTACGCTACCGAATCATCCCATCCTGCTACAGAATACACTTCCCTGAACATTTGAAAAGCCACCGCTCTCATGATATTGTTCTCGTTTGCGTGGATTGTCATGAGAAAGCACATTCTGCCGCCGAGAAGTACAAGAAGAAAGTAGCTTCAGAATTTGGGATACCACTATTTGTACACAGAGTGGTTAATTCTAATGAAGAAATTAACGTCTCTGGATCTTCGACATCTGTCATGAAACTTGGTGATGGAGGTGTGTCTCCTTTAGAGTTGCGAACGGCAGCAATGGCTCTTTTACGGCATGGACCACGGATGCCACCTCAGCGCCATGAGGAACTCAAAGAGGTTGTGAAGAAGTATTATGGAGGGAGAGAGATATCTGAGGAAGACTTAGAAAATGCTTTATTAGTTGGAATGAGTCCTCATGAGAGAAGACGAATGAGGAAAAAGAGAGGCTTGTCTCTTAATGGTGGTGTGCAACTTTCTTCCTCCAACAAGGCATTAAATACTGATATTGAAGATGGATCAGATGCGTCTAAAGAAGAGCCAACACTGGTTGCAACGGATAACATTAGCAACGATGAAGTATATGAGCCTAAAAATGCTCCTATTTTGGATTCCAATGTTGATTCTGAAGTTGTTACAGATCCATCTGCCAAACTAAATGGGTCCGTACACCCAAGTTCTGATAGTGTCATCTTCGCTACATGCAGTTCAAAGCTGTCGTTATTAGGTCATGGACCACATGGGAAGCAAGTTGTTGATTTCTTGATGAAGGAACATGGGGAAGATGGGGTTCGCGAATTTTGTCAAAGATGGAGACAAGTATTTGTTGAAGCTATTCATCCTCGTTTTTTACCTGCGGGCTGGGATGTGACGCACAGTGGTAGAAGAGAGTTCGGGGAGTTCAGCGTGTATAATCCTGCAAATAAGGCTCCGGCACCTGCTACTGCTGCTAAGGATTAA	2673	40.7	MENKDKIKIAFTITCVAVVSIVLANRFRKHRKRKQNISSCYLKSEAKPQHNFKRVLASNSYTPFKHLKLDDSSTDLHPYESEIKALLEKPQLEFEFCNAFMDMDMDMSDTYVWVDDESKLEELVEVLSKERVFAVDTEQHSLRSFLGFTALIQISTRKEDFLVDTIALHDVMGILCPVFANPNICKVFHGADNDIIWLQRDFHIYVVNLFDTAKRSLAYLLETYCGVTTNKFYQREDWRQRPLSKDMVEYARMDAHYLLYIADCLVAELKLQKNENSASLEDKFDFVFEANRRSNASCLQLYTKDLEASPGQSAASSIISRHLNDHGSSTNTNQELIRRLCSWRDLMARMHDESLKYVLSDNAVVALAEKVPLTATDICTTISQADIEMDSVGSDSSPRFPSSVVLSHLDDFRYLLQDEMNNVDDIFQLVLKKHLGSNGSCPFSLYNYGLLSKTNTKASKRLVSKKNGYKFTKQVARKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLQRDLAKLVDEDPPAIMLLFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLVCVDCHEKAHSAAEKYKKKVASEFGIPLFVHRVVNSNEEINVSGSSTSVMKLGDGGVSPLELRTAAMALLRHGPRMPPQRHEELKEVVKKYYGGREISEEDLENALLVGMSPHERRRMRKKRGLSLNGGVQLSSSNKALNTDIEDGSDASKEEPTLVATDNISNDEVYEPKNAPILDSNVDSEVVTDPSAKLNGSVHPSSDSVIFATCSSKLSLLGHGPHGKQVVDFLMKEHGEDGVREFCQRWRQVFVEAIHPRFLPAGWDVTHSGRREFGEFSVYNPANKAPAPATAAKD	890

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sain12g00650	890	Gene3D	-	25	308	IPR036397	GO:0003676(InterPro)
	Sain12g00650	890	SUPERFAMILY	Ribonuclease H-like	47	273	IPR012337	-
	Sain12g00650	890	SUPERFAMILY	HRDC-like	330	383	IPR010997	GO:0000166(InterPro)\|GO:0044237(InterPro)
	Sain12g00650	890	Pfam	HRDC domain	334	377	IPR002121	GO:0003676(InterPro)
	Sain12g00650	890	PANTHER	POLYMYOSITIS-SCLERODERMA AUTOANTIGEN-RELATED	31	880	IPR045092	GO:0000175(PANTHER)\|GO:0000175(InterPro)\|GO:0000176(PANTHER)\|GO:0000467(PANTHER)\|GO:0000467(InterPro)\|GO:0003727(PANTHER)\|GO:0005730(PANTHER)\|GO:0071035(PANTHER)\|GO:0071036(PANTHER)\|GO:0071037(PANTHER)\|GO:0071038(PANTHER)\|GO:0071039(PANTHER)\|GO:0071040(PANTHER)\|GO:0071044(PANTHER)\|GO:0071051(PANTHER)
	Sain12g00650	890	MobiDBLite	consensus disorder prediction	724	762	-	-
	Sain12g00650	890	Pfam	3'-5' exonuclease	111	269	IPR002562	GO:0003676(InterPro)\|GO:0006139(InterPro)\|GO:0008408(InterPro)
	Sain12g00650	890	Gene3D	HRDC domain	321	427	IPR044876	-
	Sain12g00650	890	MobiDBLite	consensus disorder prediction	725	741	-	-
	Sain12g00650	890	SMART	35exoneu6	111	270	IPR002562	GO:0003676(InterPro)\|GO:0006139(InterPro)\|GO:0008408(InterPro)
	Sain12g00650	890	ProSiteProfiles	HRDC domain profile.	330	419	IPR002121	GO:0003676(InterPro)
	Sain12g00650	890	FunFam	Polynucleotidyl transferase ribonuclease H fold protein with HRDC domain	46	308	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sain12g00650	K12951	cobalt/nickel-transporting P-type ATPase D [EC:7.2.2.-]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Sain	Sain-Chr10:116519758	Sain12g00650	Sain-Chr12:15235087	dispersed
	Sain	Sain-Chr10:145979354	Sain12g00650	Sain-Chr12:15235087	dispersed
	Sain	Sain-Chr12:15235087	Sain3g01349	Sain-Chr3:58840577	dispersed
	Sain	Sain-Chr12:15235087	Sain11g01322	Sain-Chr11:32703877	transposed