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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00651 ATGAACCGTCGGATCAGAAGACGATCTGCCATCACCGACGGCTACCTCCGCTACCTAAAGCCCGGCGCCCTTGCCAAACTCCGCGACTCCAAAATCAACGCCATAACTCACCACCGATCATCCGATTCTCAGATCTATCTCTATCGTGCTATATCGTTCACTAACGTTGCCGGTGCTTCTCCTTCCCGATCACCTGCTGCTTCTCCTTTGCGATCTCCCAACGCTACTCAGCAACAACAACAGGAAGCTACTGGTACTGTCGCGGCAACTGACGGCGGTTCCCCTTGCTTTTCCGTGAGATTTTACGGGCCTAGGTGTCCGCAGAGGAAGAAGCTTATGGCTGCTAGATCTATGTTTTTTCTGAATAACCCTAACCCTAACCTTCCGACACCAGATGGTCCTGAACCGGTTATTGATGCTTTTACTAATGATTTCTTAGTTGCTCATTGA 450 50.22 MNRRIRRRSAITDGYLRYLKPGALAKLRDSKINAITHHRSSDSQIYLYRAISFTNVAGASPSRSPAASPLRSPNATQQQQQEATGTVAATDGGSPCFSVRFYGPRCPQRKKLMAARSMFFLNNPNPNLPTPDGPEPVIDAFTNDFLVAH 149
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00651 149 PANTHER OS06G0679600 PROTEIN 1 149 - -
Sain12g00651 149 MobiDBLite consensus disorder prediction 58 93 - -
Sain12g00651 149 MobiDBLite consensus disorder prediction 58 88 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00651 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
138798 Sain12g00651 Sain13g02173
138799 Sain12g00651 Sain3g00398
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr12:15246746 Sain13g02173 Sain-Chr13:127591402 wgd
Sain Sain-Chr12:15246746 Sain3g00398 Sain-Chr3:9379514 wgd