AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00657 ATGGTGGTGGGTGGTCAATTTCTCAAATTCACATTGCTGCTGCTGCTGCTTTTCTGTATATCTGAATCAGATACCAGCCCTTTCCAGATACAATTAAACATGAAACAAGCTCAATCACCTGCTGCTCCTTTGGATCTTCTTCCATTCATGCCATTCACCAACCTTACCCTGCCAGATTTGTCAGGAAAGTGTCCGCTGAACTTCTCAAATGCCGAAAGTATACTGGCCACAACAGCCATAGATTGCTGGAGTTCATTAGCTCCATATCTAGCCAATGCCATCTGTTGTCCTCAGCTAGATGCCGCAATCAACATCCTTATCGGCCAATCAAGTTTCTCTTCTCGGACTCTTGCCGTTGCCCACCTTCATGCCAACGACTGCGTCTCAGATATAGCACAAGTTTTGATCGCTCGTGGTTCCAATAACAACCTTCTCAATATATGCTCAATATACCCATCACAACTCACCCAAAATTCTTGCCCTATTGTTGATGTTTCCGATATTGAAAACACTGTGAACGTTTCTACGATTCTTGAATCTTGTGAAAGGATTGATCCGGTGAAAGAGTGCCGCCATAAAGTTTGTCAGAACGCAATCACGGCTGCTGCTGTAAAGATTGCTTCAACGAATTACAGTATGCCGGATGTGGTTGGAGATGATCCTCTATCGCGTGTTCGTGTGGCGGTGATTGATGATTGTAGGAAGATTGTTCTTCGATCGCTGGCAAGTAGACTCGATCCCGCTGATGGAAATAAAGTTTTACGGCGAATTTCTAGTTGCGAGATCAACAAAGTTTGTCCGCTCGTCTTTCCTGACCTTAAAAATGTTACGAAAGAATGCGGAGATACGATTAGTAACGAGACAGCTTGTTGTGATGCTATGGAGAAGTACATTACTCGGTTGCAAGTACAAAGCTTCGTTACAAACTTGCAAGCCTTCAACTGTGCTTCTTCGCTTGCTGCAAATTTGCGAAAAGCTAACGTCTCCAGCAACGTATACAAAATTTGTGGTGTAAAACTCAAAGATTTCTCCCTACAAGTTGGATCACAAGACTCTGGCTGCCTCTTCCCAAGCTTGCCCTTTGACGTTACATATGACCAAAGTTCGGGAATCGTCTTCAAATGTGACCTTAACGACAACGTTCCAGCGCCATGGCCTTCTTCTTACGCTTATTCTCCACCTCCATCATCTAATATAAGTGTATCTGGCACAGATCTTCCAGCACTTCCCAAAGCAACATCTGATCATAGTGGGCTGCAGAGTACTCTGTTCATTTCAACTTTGTTGGTGCTCAACTGGTTCATTTGA 1308 43.96 MVVGGQFLKFTLLLLLLFCISESDTSPFQIQLNMKQAQSPAAPLDLLPFMPFTNLTLPDLSGKCPLNFSNAESILATTAIDCWSSLAPYLANAICCPQLDAAINILIGQSSFSSRTLAVAHLHANDCVSDIAQVLIARGSNNNLLNICSIYPSQLTQNSCPIVDVSDIENTVNVSTILESCERIDPVKECRHKVCQNAITAAAVKIASTNYSMPDVVGDDPLSRVRVAVIDDCRKIVLRSLASRLDPADGNKVLRRISSCEINKVCPLVFPDLKNVTKECGDTISNETACCDAMEKYITRLQVQSFVTNLQAFNCASSLAANLRKANVSSNVYKICGVKLKDFSLQVGSQDSGCLFPSLPFDVTYDQSSGIVFKCDLNDNVPAPWPSSYAYSPPPSSNISVSGTDLPALPKATSDHSGLQSTLFISTLLVLNWFI 435
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00657 435 Pfam SPARK 61 207 IPR043891 -
Sain12g00657 435 PANTHER GPI-ANCHORED PROTEIN 30 429 IPR040336 GO:0005886(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00657 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr12:15378131 Sain9g02498 Sain-Chr9:154167683 dispersed