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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00699 ATGAGCTCTATCAATGTGAAAATGGAAAAGGCCAACGCGATATTGCGGTTCCACAGGCTTCAAACAATCACGACTCTGTTCAGATTCCTTGAGATGTTTGTTTTTCTAATTGTGATTTCTAGGTTTTCCTCTCAGTTGCCGTTCTCCGTTAGATTAATCTCCGCCGATCATTTCAGAGGAATCTCATTCGCGATTTTTAGCCCTAGGTTTGTTTTTGTGATCGGAAACGTCATCGTTTTAATTCTGTTATTCAAATCTCGAGTTGTTGAAAATGGAGATCGCGAAGGAAAAATCGATGTTTACGATGAGTACATACGAAGATGTGAGAAAAAGGTAGTAAATACTAAAGCTATTATTGCAATTAAAGACAGGAAGATTTGCAGGAGTCAATCGGAGAATCTAATGATCGTGGAATGCAAAGATAATAGTACTCACCGGAAACTAAGGCGATCGGTGACTGAGAGAAAAGTGACGAAGAAGCTAGATCGTGGTGGTGGTGAGACGGCGGCTCAGGAGAAGAGTTGCGCGGCGGAGGATGAAATGAGCAGCGAAGAATTCCGGCGAACGGTGGAGGCATTTATTACGAGGCAGCAACAATCTCTGAGAGATGAAGAGTTGTCTCCGATTACATACATCGGTGCATAA 645 42.48 MSSINVKMEKANAILRFHRLQTITTLFRFLEMFVFLIVISRFSSQLPFSVRLISADHFRGISFAIFSPRFVFVIGNVIVLILLFKSRVVENGDREGKIDVYDEYIRRCEKKVVNTKAIIAIKDRKICRSQSENLMIVECKDNSTHRKLRRSVTERKVTKKLDRGGGETAAQEKSCAAEDEMSSEEFRRTVEAFITRQQQSLRDEELSPITYIGA 214
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00699 214 PANTHER TRANSMEMBRANE PROTEIN 5 207 - -
Sain12g00699 214 MobiDBLite consensus disorder prediction 159 181 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00699 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
138818 Sain12g00699 Sain13g02153
138819 Sain12g00699 Sain3g00557
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr12:16177187 Sain5g00992 Sain-Chr5:64465486 dispersed
Sain Sain-Chr12:16177187 Sain13g02153 Sain-Chr13:127133246 wgd
Sain Sain-Chr12:16177187 Sain3g00557 Sain-Chr3:14695032 wgd