Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sain12g00714 | ATGGCATCTAGCTCAATGTCTTCACGTGGATCAGGTTCATGGACTGACAAACAGAACAAGGCCTTCGAAAAGGCGCTCGCTGTGTTTGACAAAGATACCCCTGACCGCTGGCACAATGTCGCCAAGGCCGTTCCTGGGAAAACCGCACAGGAAGTGGAGAGGCATTTTGAACTACTTGTGGAAGATATCAACAGCATCGAGAGTGGCCGAGTTCCTTTCCCCAAATACAGGACTACTAAAGGGCATCATAACTAA | 255 | 49.02 | MASSSMSSRGSGSWTDKQNKAFEKALAVFDKDTPDRWHNVAKAVPGKTAQEVERHFELLVEDINSIESGRVPFPKYRTTKGHHN | 84 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sain12g00714 | 84 | ProSiteProfiles | Myb-like domain profile. | 6 | 60 | IPR001005 | - | |
| Sain12g00714 | 84 | SUPERFAMILY | Homeodomain-like | 13 | 67 | IPR009057 | - | |
| Sain12g00714 | 84 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR-RELATED | 1 | 82 | IPR044636 | GO:0003700(InterPro) | |
| Sain12g00714 | 84 | FunFam | Transcription factor SRM1 | 6 | 73 | - | - | |
| Sain12g00714 | 84 | SMART | sant | 10 | 62 | IPR001005 | - | |
| Sain12g00714 | 84 | Gene3D | - | 4 | 73 | - | - | |
| Sain12g00714 | 84 | Pfam | Myb-like DNA-binding domain | 12 | 56 | IPR001005 | - | |
| Sain12g00714 | 84 | ProSiteProfiles | SANT domain profile. | 9 | 64 | IPR017884 | - | |
| Sain12g00714 | 84 | CDD | SANT | 14 | 60 | IPR001005 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Sain12g00714 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Sain | Sain-Chr12:16823540 | Sain8g02922 | Sain-Chr8:176697584 | dispersed | |
| Sain | Sain-Chr12:16823540 | Sain7g01104 | Sain-Chr7:89051461 | wgd |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Sain | None | None | None | TF | MYB-related |