AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00724 ATGGATGAACGGTTAATACAGCGGTTGGAATCCGCTATAGCCAGGCTAGAATCGATCTCCATCGGTTCTCAGCCCCAAGCCGTTGCGTTTGACGCCGCATCAGCCGCATCGGAACCATCAATCGTCGCATTTGAAGATCTGGTGGCGGAATATGTCCGTAAGGTTACCGATGCTGCGGGGAGGATTGGCGGACAAGTTCAGGATATTACGAATGTTGTCACTGAAGCTTTCTCTGCTGAGAAGGAGCTTCTCATGAGGATCAAACAAACGCAGAAACCTGATGCGAGAGGAATGACAGAATTTCTCAAGCCGTTATATGAAAAGTTAACTGAAGCAAATAGCATGTCAGAAGGACCACGTTCTGATTTCTTCAACCACCTAAAAGCCGCTTCCGAGAGTCTAACAGCTTTAGCATGGATTGCATATACGGGGAAAAATTGCGGAATGAGCATGCCTATTGGACATGTGGAAGAATGTTGGCAATCAGCTGAATTTTACAGCAACAAGGTTCTTATAGAATACAGAAATAAAGATCCGGATCACGTGGAATGGGTAAAAGCTCTTAAGGAAATTTATGTACCAGGGTTAAGGGATTACGTTAAGAGTCATTATGCTTTAGGCCCTGTATGGAGTGCGACAGGGGCAACCGTAGCCACATCTTCTAAACCAGGTGCTCCTGCTCCTCCAGGGCCTCCACCAGCGAGCTCAGGATCTTCTGCATCATCTTCATCTCAACCAAAGAAAGGAATGGCCGCTGTTTTTCAGGAAATTGGTTCAAAACCAGTTACTGCTGGATTAAGAAAAGTTACAGATGATATGAAGACCAAAAATCGTGCAGATAGAGCCGGGTTTGTCAGTACTGGTGAAAAACAAGTCCGCAAGAGTGCGCCCGCTGCTGCTAAAGTAGGACCGCCAAAATTTGAGCTTGTAATGGGTCGCAAATGGGTTGTTGAGAATCAAATCGGCGCGAAGGATTTGGTGATTGATGAATGTGATCCAAGGCAGACAGTATATATTTTTGGATGCAAAGATTCAGTCCTACAGATCCAAGGGAAAGTTAACAACATAACCGTCGACAAATGCACAAAAATGGGTGTCGTATTCACGGATGTTGTTGCTGCCTTCGAGATTGTTAATTGCAGCAGTGTTGAGGTGCAATGCCAGGGTGTAGCCCCTACTATTTCAATAGACAACACGGCAGGATGCCAATTATACTTGAGCAAAGATTCTCTCGAGACTTCTATAACAACTGCCAAGGCAAGTGAAATCAACGTGATGGTACCTGGTGACGATCCTGATGCTGATCTGGTGGAACATGCTTTGCCACAGCAGTACATAAACACTTACCAAGATGGTCACTTCGTTACCACCCCGGTCTCCCACTCCGGAGCCTAA 1395 45.88 MDERLIQRLESAIARLESISIGSQPQAVAFDAASAASEPSIVAFEDLVAEYVRKVTDAAGRIGGQVQDITNVVTEAFSAEKELLMRIKQTQKPDARGMTEFLKPLYEKLTEANSMSEGPRSDFFNHLKAASESLTALAWIAYTGKNCGMSMPIGHVEECWQSAEFYSNKVLIEYRNKDPDHVEWVKALKEIYVPGLRDYVKSHYALGPVWSATGATVATSSKPGAPAPPGPPPASSGSSASSSSQPKKGMAAVFQEIGSKPVTAGLRKVTDDMKTKNRADRAGFVSTGEKQVRKSAPAAAKVGPPKFELVMGRKWVVENQIGAKDLVIDECDPRQTVYIFGCKDSVLQIQGKVNNITVDKCTKMGVVFTDVVAAFEIVNCSSVEVQCQGVAPTISIDNTAGCQLYLSKDSLETSITTAKASEINVMVPGDDPDADLVEHALPQQYINTYQDGHFVTTPVSHSGA 464
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00724 464 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 40 233 IPR036222 -
Sain12g00724 464 SMART carp 380 417 IPR006599 -
Sain12g00724 464 SMART carp 342 379 IPR006599 -
Sain12g00724 464 FunFam Adenylyl cyclase-associated protein 303 463 - -
Sain12g00724 464 FunFam Adenylyl cyclase-associated protein 40 215 - -
Sain12g00724 464 ProSiteProfiles C-CAP-cofactor C-like domain profile. 304 441 IPR017901 -
Sain12g00724 464 Pfam CAP, N-terminal domain 44 207 IPR053950 -
Sain12g00724 464 Pfam CAP N-terminal conserved motif 3 38 IPR013992 GO:0003779(InterPro)|GO:0007010(InterPro)
Sain12g00724 464 ProSitePatterns CAP protein signature 1. 5 17 IPR018106 -
Sain12g00724 464 Gene3D - 303 463 IPR016098 -
Sain12g00724 464 MobiDBLite consensus disorder prediction 216 250 - -
Sain12g00724 464 Pfam Adenylate cyclase associated (CAP) C terminal 304 461 IPR013912 GO:0003779(InterPro)|GO:0007010(InterPro)
Sain12g00724 464 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 304 463 IPR036223 -
Sain12g00724 464 Gene3D - 40 215 IPR036222 -
Sain12g00724 464 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 3 462 IPR001837 GO:0003779(PANTHER)|GO:0003779(InterPro)|GO:0005737(PANTHER)|GO:0007010(InterPro)|GO:0007015(PANTHER)|GO:0008179(PANTHER)|GO:0019933(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00724 K17261 adenylyl cyclase-associated protein
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Event-related genes

Select Gene_1 Gene_2 Event_name
138826 Sain12g00724 Sain3g00586
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr12:17241432 Sain3g00586 Sain-Chr3:15889219 wgd