AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00743 ATGGCTCACGGATTTGCATCTTGCGTTCTAATTCTTCATCTTCTTCTTTCTATGCATACTAAAGGAGGTGAAGCTATAAGATCTGATGTCATAAGACTCAATACTATGGATGATGATGCTCATAGCATCCATCATCATGATCATATGCACCAAGATCATGATCATGATCATCATCCATCATCATCGTCATCATCATCATCAACGAATCAAATCGACCCTCAAGTCATGGTTTTCTTCATGTTACAAGACTTAATTGTAGGTCAAGTGATGCCAATTTACTTTCCAAACCGACACATTTCCCCGTCTCAACTCCTCCCGAAACACGAAGCCGATAACATCCCATTTTCGTTTGCGGAATTCCCAAACCTCCTTCGATTGTTCTCATTCTCACAACACTCTCCACAAGCCAAAGCCATGGAAAGCACACTCAAAGAATGTGAGGTCAAACCCATAAAGGGCGAAACCAAGATTTGTGCCACCTCGTTGGAATCCGCACACGAATTCGCACACAAAATCTTTGGATTTGACACCGAAGTCAAAACTTTGACCACAACCCACCTCAAGAATTCAAATATTGGACTCTTACAAAACTATAAAGTGATTGAAATTTTGCAAAACATACCTTCTCCAAAATTAGTGGCTTGCCACACATTGCCATACCCATATGCGGTGTTCTATTGCCATAGCCAAGAGAGCGAAAACAAGGTTGTTATGGTTTCGTTAGAAGGTGAAAATGGCGATTTGGTTGAGGCTTTGGGTGTTTGTCACATGGACACATCTCAGTGGAACCACGATCACGTTTCGTTTAGGGTTCTTGGGGTTGAACCGGGAACCACGCCGGTTTGCCACTTCTTTCCGAGTGATAATTTTGTGCTTATACCTCTTTCTGCAACAATGTAA 900 42.0 MAHGFASCVLILHLLLSMHTKGGEAIRSDVIRLNTMDDDAHSIHHHDHMHQDHDHDHHPSSSSSSSSTNQIDPQVMVFFMLQDLIVGQVMPIYFPNRHISPSQLLPKHEADNIPFSFAEFPNLLRLFSFSQHSPQAKAMESTLKECEVKPIKGETKICATSLESAHEFAHKIFGFDTEVKTLTTTHLKNSNIGLLQNYKVIEILQNIPSPKLVACHTLPYPYAVFYCHSQESENKVVMVSLEGENGDLVEALGVCHMDTSQWNHDHVSFRVLGVEPGTTPVCHFFPSDNFVLIPLSATM 299
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00743 299 SMART BURP-2 76 295 IPR004873 -
Sain12g00743 299 MobiDBLite consensus disorder prediction 45 60 - -
Sain12g00743 299 MobiDBLite consensus disorder prediction 45 69 - -
Sain12g00743 299 Pfam BURP domain 77 293 IPR004873 -
Sain12g00743 299 ProSiteProfiles BURP domain profile. 78 295 IPR004873 -
Sain12g00743 299 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 40 294 IPR044816 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00743 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr12:17574362 Sain12g00747 Sain-Chr12:17938413 proximal