AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sain12g00747 ATGGCTTCTTCTTCCTGTTGCACCCTCCTCTTCCATGTTCTATTGCTTATACAGATTTGCAGTTGTCGCGAAATCTTCGACAAGAACTCGAGAAACGATCACAACGAAGAAAATCATATAAAAGTTTACGGGAGAAAAGAAGTTGATGATTTGGATCCTGCTCTAAAAGTGTTCTTCAATGTAAACGATTTATATATGGGCAAAAAGATGCAAATTTATTTCGCCATTAACGACCCATCAACAACTCCTCGGCTTCTAGCCAGAGAACAAGCCGACTCAATACCATTTTCCTCGTCAAACCTCGGGTACCTTCTCGACTTTTTATCGTTAGCCGATGATTCAGCGCAAGCCAAAGCCATGGAGTCGACACTAAAACAATGTGAGCTTGAGCCGACAGCCGGTGAGGTGATGTTCTGCGCCACGTCCTTAGAATCCATGCTGGACTCGACACGTGGCATATTGGGTATGGTCAAACTGAAGACGTTGACCACCAAGATCCATGATTTGTTGGATTCAAATCATACGCTCTTGCAAGAGTATACGTTTTTGAAGGAGCCAATGGAGGTTCATGTTCATGACATGGTGGCTTGTCATACCATGGCTTATCCTTATGCAGTTTATTATTGCCATGGTCAAAAGGGGTCAAATAGGGCGTTTGAGATTTCTTTAGGGGGTGAAAATGGAAATAGAGTGGATGCTATTGCTGTCTGCCACATGAATACTTCCATGTGGGACCCTGACCACGTGGCGTTTCGCGTACTTGGAGGCCAGCCTGGCAGCTCGCCGGTGTGCCATTTCCTTCCCGCCGATAATATCCTGTGGATCCCGTCATCTTAG 837 45.4 MASSSCCTLLFHVLLLIQICSCREIFDKNSRNDHNEENHIKVYGRKEVDDLDPALKVFFNVNDLYMGKKMQIYFAINDPSTTPRLLAREQADSIPFSSSNLGYLLDFLSLADDSAQAKAMESTLKQCELEPTAGEVMFCATSLESMLDSTRGILGMVKLKTLTTKIHDLLDSNHTLLQEYTFLKEPMEVHVHDMVACHTMAYPYAVYYCHGQKGSNRAFEISLGGENGNRVDAIAVCHMNTSMWDPDHVAFRVLGGQPGSSPVCHFLPADNILWIPSS 278
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sain12g00747 278 ProSiteProfiles BURP domain profile. 58 277 IPR004873 -
Sain12g00747 278 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 41 277 IPR044816 -
Sain12g00747 278 SMART BURP-2 56 277 IPR004873 -
Sain12g00747 278 Pfam BURP domain 57 275 IPR004873 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sain12g00747 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Sain Sain-Chr12:17574362 Sain12g00747 Sain-Chr12:17938413 proximal